Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g01009 ATGATAAGTGCTCAAAGGGCTGCTAGGAGGGAAAACTGGAGGGAATTCAAGAAAATCTTTGAAGAAGATAGGATGCGATTACTTGAACCGCTTGACTTATTTGGGAACACTGCCATCCACATTGCGACTCACTCCAATAGTCCAAATCTCTTGCAGGAACTTCTGGAGATGCTTCCTCGACAAGAAAGGTGGCGCGCGATGAGAATGGGGAATTGCGTCAATAACACCCTTCTGCATGAGATTATCTTTTGCACAACGGTCGAAATGGCTGGTGTTGTGTTCAAGTTGGAGAAGGAGCTGCAGCAAGAAGAACCATATGAGCCCCTTGTAGAGGTAAGAAATGATTCTGGTGAATCCCCTCTGTTCAGGGCTGCTAAGCTTGGAAAGCTGAAGATGCTCAAGTATATGGCAAAACATGTGGTTGGTGACATAAGAAGTCATTTTGTAAGATTTGATAGATGTTCCATTCTTCACGCTTGCATTCTTGGTCAATTCTTTGATGTTGCTATTTGGTTATTGAAATTGGATGGAAATTTGGCTCAACACAAGGATATGGATGGGTTGACATGTCTTCAACTTCTTGCCAACATGCCTCTTGTTTTTCGGAGCCAAACCCCCTCAATGGGAGCAGTGAAGAACCTTATGTATTATTTGCTTCCAGACGAAGGATATGAAATTGATGATGATTATGATGAGAAGGGAGAGGAGGAGGAAGAGAGTGTTGTGTTCAGACAGAAAACAGATCTAGAAAGTGGTCCACTGGATGAGGCAAAGCAACCCGTTCATCAATTTGCTGCTTTTTCAAGGATCAACTATTCTATATGGAAAATTCTGGCCAAAGAGTTCAATGGGATTGGACATATTTGGCAAAAGAAGAAACAACACAAGTTAGCAGAGTGTCTGGCCGAGTTGTTAGTGCAGAAGGACTTCTCATGGCAGATTTCTTTTCATTCAAATTTTCAACCATTGATTGTGTTGCCAATTCTTTCCTCCAAACTAGACAGAATAAAAGAAATTCAGCTGATGAAGGAGAAACGCCAGTTAGTTGAAATAGCTCATTCTAGAATCAGCAAACCTTTGCTCAAGGAATCCATTTCCGAAGCATCCCATTTTAAAAACTACACACCTCTTCTCATGGCAGCCGGTTCGGGAATCGTAGAAATTGTTGAAAAAATCATTGACATGAATCCTGAGGCTATTAGTCATGTTAGCCAGGATGAACACAATGTTCTACACATGGCTGTGAAGCACCGGCAGCTTAAAATCTTCAATCTGATAAAGAGAAATTCTGCATTCAAATCATTGATACACAGGATAACCGGGGAAGGTCGCACTCTCTTGCACCAAGTTGCTAGAATGGAGTTTTACAAAGAGCAACGGCTCCCTGGTGTGGCGTTCCAACTGCAAGACGAGTTGCGTTGGTACGAAAGAGTGAGAAGGATTGTTCCTCCTCACTACTTAATGCATTGTGACAAAGACGGCCTAACTGCAAAAGATGTTTTGGAAATGGAGCATCAGGATATGCACAAAGAGGCAAAGTCCTGGATAAAGGAGACAGCTCAATCATGCTCCACCGTAGCAGTTCTCGTTGCCACAGTTGTCTTTGCCGCAGCCTATACAATCCCAGGTGGGAGCCAAAACGGCACGCCAGTGTTCTTCGGCTCACGAGTCTTCCTCTTCTTCACTATCACTGATGTTGTGGCCCTTGTGAGCTCACTTGCCTCAGTGGTGATGTTCCTTTCAATCCTGACATCGCCGTTCGAGCTATGGGATTTCTACAAGTCCCTCCCAAGAAAGCTCAGCCTGGGATTTGCATTGCTGTTCTTCTCATTGGTGTGCACAATGCTGGCATTCAGCGCAACCGTTTTGCTGACGATTCGGTTGGATAACAAGGAATGGACTTCTATTTTGTTCTATTGTGCTGGATTCCTTCCTGTGGCTATATTTGCATGGATGCAATTCCCACTCTATAAGACTCTTCAAAAATTAGTTAGGAGGCTTTGCAACGGTGTTAAGCAGTTGGTGCCAACTACATTGATCAATTGTTTCAAAAGACACAAAAGATATTAA 2070 0.4329 MISAQRAARRENWREFKKIFEEDRMRLLEPLDLFGNTAIHIATHSNSPNLLQELLEMLPRQERWRAMRMGNCVNNTLLHEIIFCTTVEMAGVVFKLEKELQQEEPYEPLVEVRNDSGESPLFRAAKLGKLKMLKYMAKHVVGDIRSHFVRFDRCSILHACILGQFFDVAIWLLKLDGNLAQHKDMDGLTCLQLLANMPLVFRSQTPSMGAVKNLMYYLLPDEGYEIDDDYDEKGEEEEESVVFRQKTDLESGPLDEAKQPVHQFAAFSRINYSIWKILAKEFNGIGHIWQKKKQHKLAECLAELLVQKDFSWQISFHSNFQPLIVLPILSSKLDRIKEIQLMKEKRQLVEIAHSRISKPLLKESISEASHFKNYTPLLMAAGSGIVEIVEKIIDMNPEAISHVSQDEHNVLHMAVKHRQLKIFNLIKRNSAFKSLIHRITGEGRTLLHQVARMEFYKEQRLPGVAFQLQDELRWYERVRRIVPPHYLMHCDKDGLTAKDVLEMEHQDMHKEAKSWIKETAQSCSTVAVLVATVVFAAAYTIPGGSQNGTPVFFGSRVFLFFTITDVVALVSSLASVVMFLSILTSPFELWDFYKSLPRKLSLGFALLFFSLVCTMLAFSATVLLTIRLDNKEWTSILFYCAGFLPVAIFAWMQFPLYKTLQKLVRRLCNGVKQLVPTTLINCFKRHKRY 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g01009 689 PANTHER CASKIN 24 661 - -
Aip03g01009 689 SMART ANK_2a 372 402 IPR002110 GO:0005515
Aip03g01009 689 SMART ANK_2a 152 181 IPR002110 GO:0005515
Aip03g01009 689 SMART ANK_2a 406 435 IPR002110 GO:0005515
Aip03g01009 689 SMART ANK_2a 116 146 IPR002110 GO:0005515
Aip03g01009 689 SMART ANK_2a 34 63 IPR002110 GO:0005515
Aip03g01009 689 Gene3D - 3 214 IPR036770 -
Aip03g01009 689 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 24 661 - -
Aip03g01009 689 SUPERFAMILY Ankyrin repeat 367 455 IPR036770 -
Aip03g01009 689 Pfam Domain of unknown function 514 623 IPR026961 -
Aip03g01009 689 Gene3D - 335 456 IPR036770 -
Aip03g01009 689 SUPERFAMILY Ankyrin repeat 6 195 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g01009 Aip-Chr3 9669003 9671774 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g01009 300 659 Miscellaneous Gene Families AT3G12360 25.693 2.92e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g01009 - - gmx:100811106 960.674