Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00981 ATGGCCTTAGAGCTTGGTCCTGTTCTCAGCAAAACTGGTTGGGTAGGGACTTCAACCACCACCTCCTTGCCCTTTTTGAATGGTGGTTCTTCCAAGAAAAGAAGGGGAAGGAGCGAGCTCCGAGCTGTGTATGTGATGGCGACAGAGGAAGGAGAAGCTGCCACGGATAACGAAGTAAATGTTGCTTTCGAAGAAGAAGAGAAGCAAAATCAGACCGAAGTTGATGATGCAGAAGCAGAAGAAGACAATGATGACGATGAAGGAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAGGCCGAGGAGGAGGAGGAGGAGGGAGAGGGCGAATACACTTTCAGATTCACCAACGGAATGAGTCATTTGGATTTCGTTCGAAACAACGATTCCGACGTCCAACGTTACCAGCAATTCGAGCTCCTTGAGCATCAAGCTCTCGCTGATAGAAAGCGCAAAGCCCTTTCACTTTCAGATTCTCATCAGGAAGAGACTCCTTCAAAGAAGGGGAGGGAAGATGATAATCCTGGGGCAACCATGGCTGAGATAATGGAAGCAATGAATTTTGGCGCACGCAGGAGATCAAGAAAGCAAAAGAAAAGAGGTAGGCGAAAAGGATCAAGGAATAAGCTAAACCCACAGATAACAAGAATGCTCGGTGATGCGACGCTTCACTACGTTTGTCGCCGTTATGACCAGGCTATAGCTGTCTCACATGAAGTTATTAGGCTGGCACCAAATGTGGCTGATTCGTATCACACCCTTGGACTTGTATATTATGACCTTGAGGATTACAAAAGGGCGATGGATTTTTACATGATTGCTGCTCATTTGACTCCTAAAGATTCATCCCGTTGGAAAATGCTTTATGACTGGTCCAGAGAACAAGGTGATATTGGTCAAGCCAGTTACTGCCTTTCCAAAGCAATAACAGCAGATCCCAAGGACGAGACTCTTAGGAAAGAACGTGCAATGTTTTATGTTGAGCTTGGAGATTATCAAAAAGCTGCTGCTGCATATGAGCAAGTACATCACCTTTGTCCTGAGAATGTTGAAGCACTAACAGATGCAGCTAAGTGCTACCAAAAATGTGGTCAAGTTGCCTGTTCAATCCAAATTCTTGAAGATTATCTAAGGAGTCAACCAGACAAAGCTCATGCAAGCTTAGTTGACCTATTGGCTACTATATACATGGAAACTAAGGCACATGACAGAGCTCTTCAGCATATTGAGCATGTTCGAATAGTAAATTCAGGGGAAGAAATGCCTTTGAACCTGAAAATTAAGTCTGGAATCTGCCATGCTCATCTTGGAAACATGGAGAGGGCTCAGGCTTGCTTCAGTGACATAAAACCAGAGAATGCAATTGAACATGTTGAGTTGGTCACAGAGGCTGCAGACTCCTTAATGGAACTTGAGCATTATGACTCCGCATTGAGTTATTATTTGATGTTGGAAGGCAATGGTGGAAATGAACATGGTCTTCTGTATCTGAAAATTGCTAGGTGTTATCTATCCTTGAAAGAAAGGTTACAAGCAATTCACTTTTTTAGCAAAGCCCTAGAAACACTACAAGATGATGTTGATGCACGCATTACGTTGGCTTCCCTTTTGATTGAAGAAGGGAAAGAAGATGAAGCCATTTCTTTGCTTTCTCCTCCAAAGGATTCTGACTCTGCTGAAGCACATTCTGTAAAGCCAAATAAATGGTGGGTTAATGAAAGGATAAAACTGAAGCTTTGCAATATATATTGGAATAAAGGGTTGCTAGATGATTTTGTGGATGCAATTTTTCCTATGATACGTGAATCATTGTACGTCGCAACCCTTCGACAAAGGGGTAAATCGAAAAAACGCCTCTCTACACGAGACCTGGTTGAAAGGGTTAGGGTAATGAATGCTCCAGAAAAGGATAATGTATTTCAAGGATTCAGGCCTATAGCTACTCCTTCTGATAGGTCTGACCGGTGGAAAGCTTCCAGGGCAAAACGATCGCTTCAAAAGAAGGAAATTGAGAAGGAGAAAAAGAAAGCTGAGGCATTGGCCGCTGGAATTGACTGGCTGAGCAATGATTCAGATATTGAACCTCAGAGAGTACACAAAGAACCTCCATTATGTAATCTTCTCAAGGATGAAGAGCATCACCAGCTAATAATTAATTTGTGCAAGGCATTAGCTTCCTTACAAAGGTATTGGGAAGCATTGGAGATTATAAATATTACTCTCAGATTGACTCATTCTGCACTTTCTGCTGACAAGAAAGAGGAACTTCGATCTCTTGGAGCTCAAATGGCATACAACACCACGGATCCTAAGCATGGGTTTGATTGTGTAAAATACATTGTTCAGCAACATCCGTACAGTGTTGCTGCTTGGAATTGCTACTACAAGGTTATGTCTAGATTGGAAAATCGAGATACAAGACACTCCAAGTTTATACTTAATATGCAAGGAAAGTTCGTGGATTGTGTACCTCCTATTCTCATTTCTGCTAATCAGTATACTATAATTAGCCATCACCAAGATGCTGCAAGGAAATACTTAGAAGCTTATAAACTTTTGCCAGAGAATCCCTTGGTTAATCTTTGCGTTGGAACTGCCTTGATCAACCTAGCATTGGGTTTAAGACTTCAAAATAAGCATCAGTGTGTTGTACAAGGTTTAGCGTTCCTCTATAACAATTTAAGGATCTGCGACAACAGCCAGGAATCATTGTACAACATAGCTAGGGCGTTCCATCATGTTGGTCTTGTAACTTTGGCAGCTTTCTATTATGAGAAAGTGCTTGCTATTCGTGAGAAGGACTATCCCATTCCAAAACTTCTCAATGAAACACCGGATATTGCTGAAAATCATAAACCCGGTTACTGTGATCTTCGCAGAGAGGCTGCTCACAATCTGCACTTGATCTACAAGAAGAGTGGAGCTCTTGATCTTGCTAGACAAGTTCTAAAAGATCATTGCACCTTCTGA 2967 0.4213 MALELGPVLSKTGWVGTSTTTSLPFLNGGSSKKRRGRSELRAVYVMATEEGEAATDNEVNVAFEEEEKQNQTEVDDAEAEEDNDDDEGGGEEEEEEEEAEEEEEEGEGEYTFRFTNGMSHLDFVRNNDSDVQRYQQFELLEHQALADRKRKALSLSDSHQEETPSKKGREDDNPGATMAEIMEAMNFGARRRSRKQKKRGRRKGSRNKLNPQITRMLGDATLHYVCRRYDQAIAVSHEVIRLAPNVADSYHTLGLVYYDLEDYKRAMDFYMIAAHLTPKDSSRWKMLYDWSREQGDIGQASYCLSKAITADPKDETLRKERAMFYVELGDYQKAAAAYEQVHHLCPENVEALTDAAKCYQKCGQVACSIQILEDYLRSQPDKAHASLVDLLATIYMETKAHDRALQHIEHVRIVNSGEEMPLNLKIKSGICHAHLGNMERAQACFSDIKPENAIEHVELVTEAADSLMELEHYDSALSYYLMLEGNGGNEHGLLYLKIARCYLSLKERLQAIHFFSKALETLQDDVDARITLASLLIEEGKEDEAISLLSPPKDSDSAEAHSVKPNKWWVNERIKLKLCNIYWNKGLLDDFVDAIFPMIRESLYVATLRQRGKSKKRLSTRDLVERVRVMNAPEKDNVFQGFRPIATPSDRSDRWKASRAKRSLQKKEIEKEKKKAEALAAGIDWLSNDSDIEPQRVHKEPPLCNLLKDEEHHQLIINLCKALASLQRYWEALEIINITLRLTHSALSADKKEELRSLGAQMAYNTTDPKHGFDCVKYIVQQHPYSVAAWNCYYKVMSRLENRDTRHSKFILNMQGKFVDCVPPILISANQYTIISHHQDAARKYLEAYKLLPENPLVNLCVGTALINLALGLRLQNKHQCVVQGLAFLYNNLRICDNSQESLYNIARAFHHVGLVTLAAFYYEKVLAIREKDYPIPKLLNETPDIAENHKPGYCDLRREAAHNLHLIYKKSGALDLARQVLKDHCTF 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00981 988 ProSiteProfiles TPR repeat profile. 247 280 IPR019734 GO:0005515
Aip03g00981 988 MobiDBLite consensus disorder prediction 69 108 - -
Aip03g00981 988 MobiDBLite consensus disorder prediction 12 28 - -
Aip03g00981 988 SUPERFAMILY TPR-like 826 936 IPR011990 GO:0005515
Aip03g00981 988 SMART tpr_5 492 525 IPR019734 GO:0005515
Aip03g00981 988 SMART tpr_5 900 933 IPR019734 GO:0005515
Aip03g00981 988 SMART tpr_5 385 418 IPR019734 GO:0005515
Aip03g00981 988 SMART tpr_5 213 246 IPR019734 GO:0005515
Aip03g00981 988 SMART tpr_5 315 348 IPR019734 GO:0005515
Aip03g00981 988 SMART tpr_5 247 280 IPR019734 GO:0005515
Aip03g00981 988 Coils Coil 657 677 - -
Aip03g00981 988 MobiDBLite consensus disorder prediction 191 208 - -
Aip03g00981 988 ProSiteProfiles TPR repeat region circular profile. 247 280 - -
Aip03g00981 988 ProSiteProfiles TPR repeat profile. 315 348 IPR019734 GO:0005515
Aip03g00981 988 PANTHER TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED 80 988 IPR039340 GO:0006383
Aip03g00981 988 Pfam Tetratricopeptide repeat 247 271 IPR019734 GO:0005515
Aip03g00981 988 MobiDBLite consensus disorder prediction 1 109 - -
Aip03g00981 988 Pfam Tetratricopeptide repeat 327 387 - -
Aip03g00981 988 SUPERFAMILY TPR-like 221 548 IPR011990 GO:0005515
Aip03g00981 988 Coils Coil 60 83 - -
Aip03g00981 988 MobiDBLite consensus disorder prediction 150 210 - -
Aip03g00981 988 Gene3D Tetratricopeptide repeat domain 423 599 IPR011990 GO:0005515
Aip03g00981 988 Gene3D Tetratricopeptide repeat domain 201 417 IPR011990 GO:0005515
Aip03g00981 988 MobiDBLite consensus disorder prediction 150 176 - -
Aip03g00981 988 Gene3D Tetratricopeptide repeat domain 629 985 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00981 262 547 Glycosyltransferase AT3G04240 22.727 4.50e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00981 K15201 - gmx:100804533 1321.22