Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00966 ATGTCTTCTTCTTCGGCCCCCTCCAAAACCCTAATGGATTTCTTCCAACCACCTTCCAAACGAATCAAAACCACTCCCACTTCACTCTTAATCCCCAACTCCAACGACGCCAGTGGCTCCTCCGCCTCACTCTCCGTTGACCAGAAATCACGCGTCGATTACAACAAGCACCTCGCAAAATCCAAGCGCAACCTCAAAATATGCCTCGATAAGGTCTCCAACTCCAAAGGTTTTGTGAAACTGGAGGAGCTGCTGGTAGAGGACACGTGGTTGGAAGCACTCTCTGGTGAGCTCCAGAAACCTTATTCACTGAGCCTCTCAAAGTTTGTTGAATCTGAGATTTGCAATAGCAACATTGATGCTGTGTATCCGCCTTCTCACCTCATCTTCAATGCTCTTAACTCTACCCCTTTCGATAGGGTTAAGGCCGTTATCCTTGGACAGGACCCTTATCATGGACCTGGTCAAGCAATGGGCCTTTCATTCTCAGTCCCTGAGGGTGTGAAAGTTCCTTCCAGTTTGGTAAATATATTTAAGGAACTCAAAGAAGATCTTGGTTGTTCAGTTCCACGTCATGGAAATCTAGAAAAATGGGCTGTACAGGGTGTTCTCTTACTTAATACCGTACTCACAGTCAGGAAACATCAAGCAAACTCTCATGCAAAAAAGGGATGGGAACAATTTACTGATGCTGTTATCAAAACAATCTCACAGAAAAGGGAAGGCGTTGTCTTTCTGTTGTGGGGCAACTCTGCTCGGGAGAAATCTAGGTTAATTGATGCAACAAAACATCATATACTTCAAGCTGCACATCCTTCTGGTTTGTCTGCAAATAGAGGCTTCTTTGGGTGCAGGCACTTCTCTCGCACAAACCAGCTTCTGGAGAAAAGGGGCATAGATCCCATAGATTGGCAACTATAA 921 0.4539 MSSSSAPSKTLMDFFQPPSKRIKTTPTSLLIPNSNDASGSSASLSVDQKSRVDYNKHLAKSKRNLKICLDKVSNSKGFVKLEELLVEDTWLEALSGELQKPYSLSLSKFVESEICNSNIDAVYPPSHLIFNALNSTPFDRVKAVILGQDPYHGPGQAMGLSFSVPEGVKVPSSLVNIFKELKEDLGCSVPRHGNLEKWAVQGVLLLNTVLTVRKHQANSHAKKGWEQFTDAVIKTISQKREGVVFLLWGNSAREKSRLIDATKHHILQAAHPSGLSANRGFFGCRHFSRTNQLLEKRGIDPIDWQL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00966 306 CDD UDG-F1-like 106 304 IPR002043 GO:0004844|GO:0006281|GO:0006284
Aip03g00966 306 Gene3D - 67 306 IPR036895 -
Aip03g00966 306 SUPERFAMILY Uracil-DNA glycosylase-like 84 306 IPR036895 -
Aip03g00966 306 Pfam Uracil DNA glycosylase superfamily 139 293 IPR005122 -
Aip03g00966 306 SMART UDG_2_a 134 294 - -
Aip03g00966 306 TIGRFAM ung: uracil-DNA glycosylase 88 297 IPR002043 GO:0004844|GO:0006281|GO:0006284
Aip03g00966 306 SMART UDG_2 134 294 IPR005122 -
Aip03g00966 306 Hamap Uracil-DNA glycosylase [ung]. 87 305 IPR002043 GO:0004844|GO:0006281|GO:0006284
Aip03g00966 306 MobiDBLite consensus disorder prediction 20 44 - -
Aip03g00966 306 MobiDBLite consensus disorder prediction 1 44 - -
Aip03g00966 306 PANTHER URACIL-DNA GLYCOSYLASE 8 306 IPR002043 GO:0004844|GO:0006281|GO:0006284
Aip03g00966 306 ProSitePatterns Uracil-DNA glycosylase signature. 142 151 IPR018085 GO:0006281|GO:0016799
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00966 Aip-Chr3 9332161 9335532 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00966 K03648 - gmx:100818241 479.559