Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00958 ATGCCGAAGCATTGTGACATGCAAATCAATATTGATGGTCAGCAGATATTCCTATTGAAAGAGAAGGTTATGTCAAAATACTGTGGAAAGTTGAAGAGAATCTTGAATCATCAAAAGAGATGTAATGTTACGAAGTTGGGGATTAGAATCAATAACTTCCCTGGAGGCCCAGATGGGTTTGAACTTGTTTCAAGGTTCTGTTACAATAACGGCAACATTCCAATCACTGTGGCTAATGTTCCTCTCCTCTATTGCTGTGCCATTTATCTTGGAATGGCAGAAGGGGTTTTCAGCAACAATCTCTTGCAACAAACAGAAACATTTCTTGATAGAATCTCTCAGTGGAAATGGCATGATATAATTGAAAGTCTCATGAATTGTGAGCATGTGTATGCATATGCAGATTGCTATGGCCTCTTAGAAAGGATCATTGTTGGTGGAGTGTTACCAAAGATTAATCAAACTCCAAATTCTTCAGATGTAAGCTTCATCAATTCATGTTCTTCACCATCCTCATATTCTTCCCCAGAAAGCACTTCTGGTAATAAGAGATTCTCTTCCTCATCAAACAAACTGGCTAATACTCCAGAAAAAATCAGGTCAACTTTGCCAAGCAAAGCATGGTGGTTTGATGATTTGGCAACTTTACCCCCAAAGATCATTGAGAAACTCTTCCAATTTCTTGGTGCATACAAAACTGACAACAACAATTTAGTCCTCACAAGGTTTTTGTTGCATTATCTGAGAAAAGCAACTCAAAAAACCAGAGTTGTTGATTGCAAAAACAGCAGTGAGAGTGAGTATGCCGCTCTTGCAGAAACAGCAGCTTATGGTGTCATTTTTGTTGGAAAGGAAACATTTTCATGCAGAGGGCTATTTTGGGTAATAAGGATTGTATCCGGTTTTGGTTTGAGTAAAGGTTGCAGGACTGAACTTGAAAGATTAATTGGTGGTGTCCTTGAACAAGCTACTTTGGATGATCTTTTGGTATCTGGCCATGATATGGGAGTTTATTATGATGTTAATTTGGTCATAAGATTGGTTAAACTCTTTGTTGATATCAATGGTTCTGATGAAGGGGTTTCATTACAGAAACTGAAAAGGGTTGGTAGGTTGATTGACAAGTATTTGAAGGAGATATCACCTGATCAGAATCTCAAGATCTCTAAGTTTCTTGGAGTAGCAGAATGCTTGCCAGATATTGCAAGGGATAGCTTTGATGGGGTCTATAGAGCCATTGACATCTATCTTGAGTCTCATCCTATGATCACATTCGAGGAAAGATCAAGATTGTGTAGATGTCTTAATTACATTAAACTCAGCTTTGAAGCTAGTAAGGATCTGGCCAAGAACCCCAGAATACCTCCAAGGATTGCAATGCAGGCTCTTATTTCTCAGCAATCAAAGATTGCAACACTGGACTATGATGAGACTGAGACTCCAAGAAAGAAGAATCCTTATCAATTAGTTTTGTACAAAGAAGGTAAGAGGAACAGCTTCTCCAAGGAGAAAAAAGACATGACACTAAACATGGATAAAATGCAATGGAAGGTAGTAGAATTGGAAGAATTATGCAAGGAAATGAACTCAAAGATGGTTAACCGGAATGCATTGTTTAATCATGCTCGTGCCAGATCCTCACCAAGATTATGCTGA 1656 0.3841 MPKHCDMQINIDGQQIFLLKEKVMSKYCGKLKRILNHQKRCNVTKLGIRINNFPGGPDGFELVSRFCYNNGNIPITVANVPLLYCCAIYLGMAEGVFSNNLLQQTETFLDRISQWKWHDIIESLMNCEHVYAYADCYGLLERIIVGGVLPKINQTPNSSDVSFINSCSSPSSYSSPESTSGNKRFSSSSNKLANTPEKIRSTLPSKAWWFDDLATLPPKIIEKLFQFLGAYKTDNNNLVLTRFLLHYLRKATQKTRVVDCKNSSESEYAALAETAAYGVIFVGKETFSCRGLFWVIRIVSGFGLSKGCRTELERLIGGVLEQATLDDLLVSGHDMGVYYDVNLVIRLVKLFVDINGSDEGVSLQKLKRVGRLIDKYLKEISPDQNLKISKFLGVAECLPDIARDSFDGVYRAIDIYLESHPMITFEERSRLCRCLNYIKLSFEASKDLAKNPRIPPRIAMQALISQQSKIATLDYDETETPRKKNPYQLVLYKEGKRNSFSKEKKDMTLNMDKMQWKVVELEELCKEMNSKMVNRNALFNHARARSSPRLC 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00958 551 MobiDBLite consensus disorder prediction 171 191 - -
Aip03g00958 551 ProSiteProfiles NPH3 domain profile. 207 469 IPR027356 -
Aip03g00958 551 Pfam NPH3 family 208 445 IPR027356 -
Aip03g00958 551 SUPERFAMILY POZ domain 3 94 IPR011333 -
Aip03g00958 551 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 2 528 - -
Aip03g00958 551 Coils Coil 504 531 - -
Aip03g00958 551 PANTHER OS12G0117600 PROTEIN 2 528 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00958 Aip-Chr3 9263099 9266992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00958 6 535 EF-hand Containing Proteins AT3G44820 27.491 5.35e-54 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00958 - - adu:107477162 1087.02