Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00934 ATGATAGATTCAAACCCTCCACTCTTGCACCATTATCAAGCACTTCTAAGGAAATCTGCCAAACTCCAACATGCTAATAATAACAATAACAATAATAGAACTATTGAAATCCACAATGATCCTATAGTGGATGAATGTGAGCTTCCACTGATAGACCTTAGTGGTCTTGAAAGTTGTAATGCCACAGAAAGAGTGGCTTGCACTGCAGCAATATGCAAGGCAGCATCAGAATGGGGATTCTTCCAAGTAGTAAACCATGGAATAAGCACTGAGCTACTGAGGAACATGAAGGAAGAGCAAATGAAGTTGTTTAAGGTACCCTTTGACAGGAAGGTCACTAGTGAGATTCTGAACAATCCTTACAGATGGGGAACACCAACAGCTACTCGCTCAAACCAGTTTTCTTGGTCAGAAGCCTTTCACATTCCTCTCACCAAGATTTCTGATGCAGCTTCCTGGGGTGAATTCACTTCTTTAAGGGAAGCAATCAATGAATTTGCACCAGCTATGTTAAAAGTTTCTAGATTATTAGCAAGCATTCTAGCAGAAAACTTGGGCTACCCAAATGATGCAATTGAAAAACTCTGTGATGCAAGCACATGCTTTCTGAGATTAAATCACTATCCATCATGCCCAAAATCCCAAGATGAAATTTTTGGATTAGTACCTCACACTGACAGTGATTTCCTTACAATCCTTTATCAAGATCAAGTTGGTGGCCTCCAACTCATGAAAGATTCCAAATGGGTTGCTGTAAAACCAAATCCAGATGCTCTAATTGTTAACATCGGTGACCTTTTTCAGGCATGGAGCAATGACGTGTACAAAAGTGTGGAGCACAAGGTAGTGGCAAATGACAAAATGGATAGATATTCCATAGCATACTTCCTATGCCCTTCTTACAGTACAATAATAAATGGCTACAGGAAACCTTCTTTATACAGGAAATTCACATTTGGAGAATACAGACACCGAATTCAGGAAGATGTCAAGAACATAGGACACAAAATTGGACTATCAAGATTTCTGCTTTAA 1035 0.3942 MIDSNPPLLHHYQALLRKSAKLQHANNNNNNNRTIEIHNDPIVDECELPLIDLSGLESCNATERVACTAAICKAASEWGFFQVVNHGISTELLRNMKEEQMKLFKVPFDRKVTSEILNNPYRWGTPTATRSNQFSWSEAFHIPLTKISDAASWGEFTSLREAINEFAPAMLKVSRLLASILAENLGYPNDAIEKLCDASTCFLRLNHYPSCPKSQDEIFGLVPHTDSDFLTILYQDQVGGLQLMKDSKWVAVKPNPDALIVNIGDLFQAWSNDVYKSVEHKVVANDKMDRYSIAYFLCPSYSTIINGYRKPSLYRKFTFGEYRHRIQEDVKNIGHKIGLSRFLL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00934 344 Gene3D - 13 332 IPR027443 -
Aip03g00934 344 PANTHER OS02G0630300 PROTEIN 29 336 - -
Aip03g00934 344 Pfam 2OG-Fe(II) oxygenase superfamily 202 299 IPR044861 -
Aip03g00934 344 SUPERFAMILY Clavaminate synthase-like 40 327 - -
Aip03g00934 344 Pfam non-haem dioxygenase in morphine synthesis N-terminal 48 143 IPR026992 -
Aip03g00934 344 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 197 299 IPR005123 -
Aip03g00934 344 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 29 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00934 Aip-Chr3 8915749 8918114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00934 43 322 Glycosyltransferase AT5G59530 30.164 3.75e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00934 - - gmx:100809329 579.326