Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00930 ATGACAACACTAGGTTTTGGAGCTGAAGCTTTATCCTATGATCACACTGTCAGCATTGAATGTTTGACACACCCTCATAAGCCACAGTACAATGGAGGAATCATCCAAAACCCAGAACTGAATAATGGATCACAAGGTTGGATTCAATTTGGTGAATCAGCAATACAACATAGAGAATCATTAGGGAACAAATACATTGTGGCACTTGAAAGAAAGCAAACTTATGATAGTGTCTCCCAGAAGGTTTTCTTGCAAAAGAACAAGCACTATGCTTTATCTGCTTGGATACAAGTGAATGAGGGAAATAATGTTGAAGTAACAGCAATGGTTAAAACAAGGAAAGGGATAAAATTTGCTGGTGCCACAATTGCTAAGTCTAATTGCTGGTCTATGATAAAGGGTGGTCTCACAACAGATACATCAGGAATTGCTAAACTCTATTTTGAAAGCAAGAATACTGATGTGGAAATATGGGTGGACAGCGTTTCCTTACAACCCTTCACAGAAGAGGAATGGAAGTCTCATCAAGATTACAATATTGAAAAGGCAAGAAAGAGAAAGGTATCAATCCAAATATTGGATAAAGAAGGAAAACCTCTTAGAAATGCAAGTGTATCACTTCAACAAACAAGGGCACGCTTCCCATTTGGAAGCGCAATAGACAAATCCATTCTCAACAACCCTGCATACCAAAAATGGTTCCTCCAAAGGTTCACAGTCACAACATTCACCAATGAAATGAAATGGTACAGCACAGAATCCGTCCGGGGCCGGGAGGACTACTCGGCCGCGGACGCGATGCTAGGCTTTGCCAGGAGAAACCGCATTGCTGTTAGAGGCCACAACATATTTTGGGATGACCCCAAATTCCAACCTGGTTGGGTCCCTTCACTTTCACCACAAGAACTCAATATAGCAGTGCAGAAGAGGCTTCAATCTGTTGTTTCAAGATACAGAGGCCAAGTTATTCATTGGGATGTTGTTAATGAGAACATGCATTTTTCATTCTTTGAGAGTAAACTTGGACAAGATTTTTCAGCTAAGGTTTTCAGTGTGGCTCATGGGATTGATCCACGTGCTACATTGTTCTTGAATGAGTTTAACACAATTGAGGATAATAGAGATAATGCAGCAAACCCTGCAAGGTATATTCAGAAGCTTAGACAGATTCAAAATTATCCTACTTTTAAGAGCAGGGGAGGAGTTGTTGGAATTGGCCTTGAAGCACATTTTCCTAATTTTCCTCCTAATCTGCCATACATGAGAGCTTCCATTGATCAACTTGTTGCCACTCGTTCACCAGTTTGGATCACAGAAATTGATGTTGCACCCCAAAATAGTCAGGTGCAATCCTTTGAACAAGTTCTAAGAGAAGCACATTCTCACCCTGGTGTCCAAGGAATTATAATGTGGACAGCAAGATCACCACAAGGTTGCTACAGAATTTGTTTAACAGACAACAATTTCAACAACTTGCCTGGAGGTGTTGTTGTGGACAAGCTTCTTCATGAATGGGGCCTCAGACCATTCTCAGCAAACACTGATCACAATGGCTTCATTCATGTTTCTCTTTTCCATGGAGATTACAAGCTGGAAATCAATCACCCTCTCATCAACAACAACAATTACTCTTTCACTCACCACCTTCAAGTGAATCCAATACATCATCATCATCATAATAATGGGTCCCACTTAACTACACAGATTGTTAAGCTTTCTGTCTAG 1725 0.4058 MTTLGFGAEALSYDHTVSIECLTHPHKPQYNGGIIQNPELNNGSQGWIQFGESAIQHRESLGNKYIVALERKQTYDSVSQKVFLQKNKHYALSAWIQVNEGNNVEVTAMVKTRKGIKFAGATIAKSNCWSMIKGGLTTDTSGIAKLYFESKNTDVEIWVDSVSLQPFTEEEWKSHQDYNIEKARKRKVSIQILDKEGKPLRNASVSLQQTRARFPFGSAIDKSILNNPAYQKWFLQRFTVTTFTNEMKWYSTESVRGREDYSAADAMLGFARRNRIAVRGHNIFWDDPKFQPGWVPSLSPQELNIAVQKRLQSVVSRYRGQVIHWDVVNENMHFSFFESKLGQDFSAKVFSVAHGIDPRATLFLNEFNTIEDNRDNAANPARYIQKLRQIQNYPTFKSRGGVVGIGLEAHFPNFPPNLPYMRASIDQLVATRSPVWITEIDVAPQNSQVQSFEQVLREAHSHPGVQGIIMWTARSPQGCYRICLTDNNFNNLPGGVVVDKLLHEWGLRPFSANTDHNGFIHVSLFHGDYKLEINHPLINNNNYSFTHHLQVNPIHHHHHNNGSHLTTQIVKLSV 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00930 574 SMART glyco_10 247 501 IPR001000 GO:0004553|GO:0005975
Aip03g00930 574 PANTHER GLYCOSYL HYDROLASE 6 557 IPR044846 GO:0004553|GO:0005975
Aip03g00930 574 SUPERFAMILY (Trans)glycosidases 199 506 IPR017853 -
Aip03g00930 574 Gene3D Glycosidases 201 508 - -
Aip03g00930 574 Pfam Carbohydrate binding domain 34 151 IPR003305 GO:0016798
Aip03g00930 574 Pfam Glycosyl hydrolase family 10 210 473 IPR001000 GO:0004553|GO:0005975
Aip03g00930 574 SUPERFAMILY Galactose-binding domain-like 31 165 IPR008979 -
Aip03g00930 574 Gene3D - 22 168 - -
Aip03g00930 574 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 201 501 IPR001000 GO:0004553|GO:0005975
Aip03g00930 574 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 6 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00930 Aip-Chr3 8881870 8885679 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00930 9 546 Glycoside Hydrolase AT4G33840 56.354 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00930 - - ahf:114927503 917.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00930 03 8881870 8885679 Aip03g00930 03 8881870 8885679 ECH