Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00925 ATGTTGATCATTCTTTTGACCATATTATCAGAAGGGTCATACACCATAACAGCACAACAATTCTCTATCAAAGAAGCAACCATAAGTGAGATTCAACTTGCATTCAGGCAAAACAAACTCACCTCAAGGAAGCTGGTTGAGTTTTATATAGAAGAAATCAAAAGGCTGAACCCAACTCTTAAGGGTGTCATAGAAGTGAACCCAGATGCATTGTCCCAAGCTGATAAAGCCGACTGCGACCGAAAAACTAAGTCGTCGACAAGTTTGCCTGCACTGCACGGTATTCCAGTTCTGCTCAAGGATAACATTGGAACCAAGGATAAGCTGAATACTACTGCTGGATCTTTTGCTTTGCTTGGTTCTGTGGTGCCTCGTGATGCCGGTGTGGTGTCGAAACTGAGGAGAGCCGGGGCAATCATATTGGGGAAGGCCAGCTTGAGTGAATGGGCTGCCTTCAGGTCTACAAAGGCTCCTAATGGTTTCAGTGCAAGAGGTGGCCAAGGAAAGAATCCATATGTTTTATCTGCTGATCCATGTGGGTCTAGTAGTGGATCAGCAATATCAACAGCTGCTAATTTGGTGACAGTAGCACTTGGAACTGAGACTGATGGGTCAATTTTATGTCCATCAAGTGCCAATTCAGTTGTAGGCATCAAACCAACAGTTGGTCTCACTAGCCGGGATCAAGTCATCCCGGTTTCGCCTAGACAAGATACTGTTGGGGCCATTAGTAGGACAGTATCTGATGCTGTCTTTGTTCTTGATGTAATTTCTGGGATTGATTACAATGATCCAGCAACTACAACTTGGTCTAAGTACATTCCTCAAGGTGGATTCAAACAATTTCTTAATCAAAATGGGCTCAGAGGGAAGAGACTTGGAATAGTAAGGAACCCATTCTTTGGCCTTTTAGCCTCTGATGTGGTTCAACACTTTGAGAAGCATTTTCAGACCTTAAGACATCAAGGAGCAGTTGTGGTAGATAATCTCCAGATAACCAATATCAATGATATCTTAAATGTGACCAAAAGTGGTGAGGCAGTAGCACTTGCTGCTGAGTTCAAACTATCCTTGAATTCATATCTCAAGAACTTGGAGGAAAAGATCAATGAGTTTGGTCAAGACATCTTCTTGTTAGCCCAAACAACAAATGGAATAGGCGCGACAGAGAAGGCGGCACTGGCCAATCTAGCAAGACTATCAAGAGAAGGCTTTGAGAAATTGATGAGTGATTATAAACTTGATGCATTGGTAACACCTGGTTCAAGTGTTGCACCTGTGCTTGCTATTGGAGGGTTCCCAGGAATAAATGTGCCTGCAGGGTATGATAGTAAGGGTGTCCCATTTGGAATAAACTTTGGTGGTTTGAAAGGATCAGAATCAAAGCTAATTGAGATTGCATATGAATTTGAACAAGCAACTAAAGTCAGAAAGCCCCCTCCAGTTTAA 1449 0.4272 MLIILLTILSEGSYTITAQQFSIKEATISEIQLAFRQNKLTSRKLVEFYIEEIKRLNPTLKGVIEVNPDALSQADKADCDRKTKSSTSLPALHGIPVLLKDNIGTKDKLNTTAGSFALLGSVVPRDAGVVSKLRRAGAIILGKASLSEWAAFRSTKAPNGFSARGGQGKNPYVLSADPCGSSSGSAISTAANLVTVALGTETDGSILCPSSANSVVGIKPTVGLTSRDQVIPVSPRQDTVGAISRTVSDAVFVLDVISGIDYNDPATTTWSKYIPQGGFKQFLNQNGLRGKRLGIVRNPFFGLLASDVVQHFEKHFQTLRHQGAVVVDNLQITNINDILNVTKSGEAVALAAEFKLSLNSYLKNLEEKINEFGQDIFLLAQTTNGIGATEKAALANLARLSREGFEKLMSDYKLDALVTPGSSVAPVLAIGGFPGINVPAGYDSKGVPFGINFGGLKGSESKLIEIAYEFEQATKVRKPPPV 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00925 482 Gene3D Amidase signature (AS) domain 9 482 IPR036928 -
Aip03g00925 482 PANTHER AMIDASE 7 481 - -
Aip03g00925 482 Pfam Amidase 45 427 IPR023631 -
Aip03g00925 482 PANTHER C869.01-LIKE PROTEIN, PUTATIVE-RELATED 7 481 - -
Aip03g00925 482 SUPERFAMILY Amidase signature (AS) enzymes 22 481 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00925 Aip-Chr3 8825177 8827177 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00925 22 482 Acyl Lipid Metabolism Gene Families AT5G64440 24.597 5.44e-26 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00925 K01426 - zju:107427553 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00925 03 8825177 8827177 Aip03g00925 03 8825177 8827177 ECH