Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00921 atgaagagACATCAAGGAGCAGTTGTAGTAGATAATCTCCAGATAACCAATATCAATAGTATCTTAAATGTGACCAAAAGTGGTGAAGCAGTAGCACTTGCTTCTGAGTTCAAACTATCCTTCAATTCTTATCTCAAGAACTTGGTGGTTTCGCCGGTGAGATCCTTGGCAGATGTTATAGCCTTTAACCAAAAGAATGCAGCTCTGCACCAAACAACAAATGGAATTGGCACAACAGAGAAGGCGGCACTGGCCAATCTAGCAAGACTATCAAGAGAAGGCTTTGAGAAATTGATGAGTGATTATAAACTTGACGCATTGGTAACACCTGATTCAAGTGTTGCATCTGTGCTTACTATTAGAGGATTCTCAGGAATAAATGTGCCTGCAGGGTATGATAATAAGGGTGTTTCATTTGGAATAAACTTTGGTGGTTTGAAAGGATCAATCAAAGCTAATTGA 462 0.3874 MKRHQGAVVVDNLQITNINSILNVTKSGEAVALASEFKLSFNSYLKNLVVSPVRSLADVIAFNQKNAALHQTTNGIGTTEKAALANLARLSREGFEKLMSDYKLDALVTPDSSVASVLTIRGFSGINVPAGYDNKGVSFGINFGGLKGSIKAN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00921 153 PANTHER AMIDASE 3 149 - -
Aip03g00921 153 Gene3D Amidase signature (AS) domain 2 149 IPR036928 -
Aip03g00921 153 PANTHER C869.01-LIKE PROTEIN, PUTATIVE-RELATED 3 149 - -
Aip03g00921 153 SUPERFAMILY Amidase signature (AS) enzymes 19 148 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00921 Aip-Chr3 8813906 8814778 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00921 K01426 - vvi:100245248 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00921 03 8813906 8814778 Aip03g00921 03 8813906 8814778 ECH