Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00908 ATGGCATCGTCATCAGATAAGGTGGTAGAAACAGTAATAGCGGGTAACTACGTAGAAATGGAAAGCGAAGGAGGGAAGGGAAAAGACATGAAAAGCAGGGTATCAAGCCTGTTATGGCACGGCGGTTCAGTGTACGACGCATGGTTCAGCTGCGCATCAAACCAAGTAGCACAAGTGCTTCTAACATTGCCATACTCCTTCTCTCAGCTAGGCATGGCGTCCGGCATAGCATTCCAACTACTGTACGGTTTGCTAGGTAGCTGGACGGCGTACCTGATAAGCATACTGTACGTAGAATACAGAACTCGAAAAGAGAGAGAGAAGGTGAACTTCAGGAACCACGTGATCCAGTGGTTCGAGGTTCTTGATGGACTCCTGGGGAAGCACTGGAGGAACGTGGGTTTGGCGTTTAACTGCACGTTTCTTCTGTTTGGATCTGTTATCCAACTCATCGCCTGTGCCAGCAACATATATTACATCAACGATAATCTTGATAAGAGGACTTGGACTTATATCTTTGGTGCTTGCTGTGCCACCACCGTCTTCATTCCTTCTTTTCATAACTACAGAATCTGGTCTTTCTTGGGTCTTCTTATGACCACTTACACTGCCTGGTATCTCACCGTTGCTTCTCTCCTTCACGGCCAGGTGGAAGGAGTTAAGCATTCCGGTCCGACCAAGTTGGTTTTGTATTTTACGGGGGCCACAAACATTCTCTACACCTTCGGGGGACATGCTGTTACTGTAGAGATAATGCACGCAATGTGGAAGCCACAGAAGTTCAAGAGCATATACTTAGTGGCAACAATATATGTGCTGACATTGACGCTTCCATCGGCGGCAGCAGTGTATTGGGCATTCGGAGACATGCTTCTGAACCACTCAAACGCATTTGCTCTGCTGCCAAGATCCCCATTCAGGGACATGGCTGTCATTTTGATGCTGATCCACCAGTTCATAACATTTGGGTTTGCATGCACCCCGTTATACTTTGTGTGGGAGAAAGCAATTGGAATGCATGAATGCAAGAGCCTCTGCAAGCGTGCACTAGTGAGGCTGCCTGTTGTCATTCCCATATGGTTCTTGGCCATCATATTCCCCTTCTTTGGCCCCATCAACTCCACCGTTGGATCTCTCCTTGTTAGCTTCACTGTTTACATCATCCCTGCCCTTGCTCACATCTTCACCTTCAAATCCTCCTCTGCCCGTCAGAATGCAGTGGAGCAACCTCCCAAGTTTATGGGAAGATGGGTCGGAACCTATGTCATCAATGTGTTTGTGGTAATCTGGGTGCTAGTAGTAGGCTTTGGATTTGGAGGGTGGGCTAGCATGGTCAACTTCATTCACCAGATTGACACTTTTGGACTCTTCACTAAGTGTTACCAGTGCCCTCCACCACAGCTGCCACATCAGCTCAACGCTACCGCCACTGCCACAGCTGCTGCTCCTTCCCCTCACCACCACTCCCTTCCTCCTCTTCATCATCGTGGTGGTCACTGA 1500 0.4853 MASSSDKVVETVIAGNYVEMESEGGKGKDMKSRVSSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMASGIAFQLLYGLLGSWTAYLISILYVEYRTRKEREKVNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLVATIYVLTLTLPSAAAVYWAFGDMLLNHSNAFALLPRSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAIGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSSSARQNAVEQPPKFMGRWVGTYVINVFVVIWVLVVGFGFGGWASMVNFIHQIDTFGLFTKCYQCPPPQLPHQLNATATATAAAPSPHHHSLPPLHHRGGH 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00908 499 PANTHER OS05G0424000 PROTEIN-RELATED 4 473 - -
Aip03g00908 499 Pfam Transmembrane amino acid transporter protein 40 433 IPR013057 -
Aip03g00908 499 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 4 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00908 Aip-Chr3 8707513 8709644 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00908 3 463 Organic Solute Cotransporters AT2G21050 87.419 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00908 K13946 - gmx:100812002 903.279