Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00906 ATGGGTCGCCTTGTCCTCTTTCTCACTATCATCGTCTTCTTCGCATTCTCTTTCTTCTCAGAGGTAGAATCAGCGCGGTTCAGGGTTATTAACAAGTGCCGCCACCCAATATGGCCGGGGCTTCTCTCCGGCGCCACCTCGCCGCCGCTACCGACCACCGGCTTCCTCCTCAACGCCGGAAGATCGAGGACAATCACCATCCCAAGGTCCTGGTCGGGTCGGATTTGGGCGAGGACACTCTGCGGCCAAGACTCCGACGGAAAGTTCTCGTGCGTCACCGCAGACTGCGGCTCCGGCAAGGTGGAGTGTGGTGGCGGGGGAGCAAAGCCGCCGGCAACATTAGCGGAGTTCACTCTCAACGGAGCTGACGGGCTTGACTTCTATGACGTGAGCTTGGTCGACGGTTACAACCTTCCGATGCTGATCGTGGCTCAGGGAGGGACGAGAGGAGGGTGCAGCGCCACCGGGTGCCTGGTGGACTTGAACGGTGCGTGTCCTTCAGATCTGAGAGTGGCGCGTGGGAATGGAACTAAAAGTGGTAGAGGTGGTGGGGTCGCGTGCAGAAGCGCGTGTGAGGCGTTTGGGGACCCAAGGTATTGTTGCAGTGAGGCTTACTCTACGCCTGACACGTGTGGCCCTTCGGCTTACTCGCTTTACTTCAAACACGCTTGCCCACGCGCGTATAGCTACGCGTATGATGACAAAACCAGCACTTACACGTGTGCTTCCGCTAATTACTTAATCATTTTCTGCCCTTTGCCTTACACCAGCCAAAAGGTGCTTGGAGCAAGAAAAGATGGCGTGCCGCTTCCTCTGGTAAACAAAACTATGATGTACTTATCAAGGCCACACTCTGGCAGTTCTTCATCCTCAGGTCCGACCCGAACACAGAGTATTGTAGCTTATGTTGTCGCCATCGCGGTGGCATTTTTCCTCTTCTGCCCTTGTTTACATGCCTTATGA 963 0.5556 MGRLVLFLTIIVFFAFSFFSEVESARFRVINKCRHPIWPGLLSGATSPPLPTTGFLLNAGRSRTITIPRSWSGRIWARTLCGQDSDGKFSCVTADCGSGKVECGGGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAQGGTRGGCSATGCLVDLNGACPSDLRVARGNGTKSGRGGGVACRSACEAFGDPRYCCSEAYSTPDTCGPSAYSLYFKHACPRAYSYAYDDKTSTYTCASANYLIIFCPLPYTSQKVLGARKDGVPLPLVNKTMMYLSRPHSGSSSSSGPTRTQSIVAYVVAIAVAFFLFCPCLHAL 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00906 320 SMART tha2 27 252 IPR001938 -
Aip03g00906 320 ProSiteProfiles Thaumatin family profile. 24 252 IPR001938 -
Aip03g00906 320 CDD TLP-PA 27 251 - -
Aip03g00906 320 Gene3D Thaumatin 25 252 IPR037176 -
Aip03g00906 320 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 6 263 - -
Aip03g00906 320 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Aip03g00906 320 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Aip03g00906 320 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Aip03g00906 320 SUPERFAMILY Osmotin, thaumatin-like protein 26 252 IPR037176 -
Aip03g00906 320 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Aip03g00906 320 Pfam Thaumatin family 31 252 IPR001938 -
Aip03g00906 320 PANTHER OS03G0233200 PROTEIN 6 263 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00906 Aip-Chr3 8697689 8700312 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00906 5 252 Receptor kinase-like Gene Family AT5G38280 49.600 4.49e-81 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00906 - - gmx:100802252 497.664