Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00905 ATGGATCTCTTCTCTTCCTCCCACTCCACTCTCATTATCTTCTTACTCCTCACACTCACACCTCAACAAGGTACTGTTATGGGTGCTACCTTCACATTCGTCAACAGGTGCGACTACACTGTCTGGCCCGGCATTCTCGCAAATGCCGGTAGCCCAGCACTCGACAGCACCGGTTTCGAGCTTCCAAAGGCCACTTCTAGAACCTTCCAAGCTCCCACCGGTTGGTCCGGTCGCTTCTGGGGCAGAACTGGCTGCAACTTCGACGGATCCGGCTCCGGTTCATGCCTCACCGGAGACTGCGGCTCCGGCCAAATGGAGTGCAACGGCGCCGGTGCAGCCCCTCCCGCCACCCTCGCCGAGTTCACCCTCGGCACCGGCGGTCAGGACTTCTATGACGTGAGCCTGGTGGACGGTTACAACCTTCCGATGATCGTTGAAGGCACTGGCGGGTCGGGGCAGTGCGCGTCGACGGGTTGCACTTCGGATCTGAACCAGCAGTGCCCTTCGGAGCTTAAAGCGTTGGATGGAAGCGCGTGTAAGAGCGCGTGTGAGGCTTTTGGGAGCCCTGAGTACTGTTGCAGTGGCGCGTATGGGTCACCTTCCACTTGTAGGCCTTCTATTTACTCGGAGATGTTCAAGGCTGCTTGCCCTCGATCGTATAGCTACGCATACGATGATGCTACGAGTACTTTTACGTGTACGGGTGCTGATTATACGGTTACCTTTTGTCCATCCTCTCCAAGTCAGAAATCTTCAAGAGACACAACACCAACAATAGGGTCAGGCATAGGAACACCAATGACACCAACAACGCCCATGGCTTCAGGAACTGGGATTGGAACACAAACAGGAACCGGAACTGGAATCGGAACCGGATCAACAGGTTCCCAAGAAGGTGCAGGTTTTGCATACACCGGTGCTGGTGTTGGTGTTGACCCTGGCCTTGGTTATTCATCATCAGTTACTGGTTCTGGTTCGGGTTCAGGTTCCGGCGAAGCCATGCTTGCAGATGGTTCATATTTAGCTGGTTTAGCCATGGGAGACTCACCTAGGAGTACAACATTTTCCTCTGCTTTTCTCTATCCTGCAAGCTTTTTTCTTATTCTATCTTGTTATTTCCTTTAG 1125 0.5342 MDLFSSSHSTLIIFLLLTLTPQQGTVMGATFTFVNRCDYTVWPGILANAGSPALDSTGFELPKATSRTFQAPTGWSGRFWGRTGCNFDGSGSGSCLTGDCGSGQMECNGAGAAPPATLAEFTLGTGGQDFYDVSLVDGYNLPMIVEGTGGSGQCASTGCTSDLNQQCPSELKALDGSACKSACEAFGSPEYCCSGAYGSPSTCRPSIYSEMFKAACPRSYSYAYDDATSTFTCTGADYTVTFCPSSPSQKSSRDTTPTIGSGIGTPMTPTTPMASGTGIGTQTGTGTGIGTGSTGSQEGAGFAYTGAGVGVDPGLGYSSSVTGSGSGSGSGEAMLADGSYLAGLAMGDSPRSTTFSSAFLYPASFFLILSCYFL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00905 374 PANTHER OS03G0233200 PROTEIN 9 270 IPR001938 -
Aip03g00905 374 ProSitePatterns Thaumatin family signature. 91 107 IPR017949 -
Aip03g00905 374 ProSiteProfiles Thaumatin family profile. 28 244 IPR001938 -
Aip03g00905 374 SUPERFAMILY Osmotin, thaumatin-like protein 29 245 IPR037176 -
Aip03g00905 374 Pfam Thaumatin family 35 244 IPR001938 -
Aip03g00905 374 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 9 270 - -
Aip03g00905 374 CDD TLP-PA 30 243 - -
Aip03g00905 374 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Aip03g00905 374 PRINTS Pathogenesis-related protein signature 78 89 IPR001938 -
Aip03g00905 374 PRINTS Pathogenesis-related protein signature 91 120 IPR001938 -
Aip03g00905 374 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Aip03g00905 374 PRINTS Pathogenesis-related protein signature 234 243 IPR001938 -
Aip03g00905 374 SMART tha2 31 244 IPR001938 -
Aip03g00905 374 Gene3D Thaumatin 29 244 IPR037176 -
Aip03g00905 374 Coils Coil 373 374 - -
Aip03g00905 374 MobiDBLite consensus disorder prediction 244 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00905 Aip-Chr3 8680153 8683097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00905 12 252 Receptor kinase-like Gene Family AT5G38280 49.004 1.08e-79 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00905 - - ahf:112789067 665.996