Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00898 ATGGGTAGCAACAACGAGGACCCAAGCTCTTCCCCATCGCACCCTCTTCTTGAACCTCACTCACCTGACTCACAAGAATCCTTCATTCACATATCATACAACCATGGCCCTCGTTCCTTCAAGGACCTTCCTTTCTTCATCCTCTTTCTCCTCTTCTCTCTTTCCACTTTCGCCTTCGGCATCTTCTCCATCTTCCACAGAAACCCCGACTACCCTGCTTCCCTCTCTTCCTTCTCCTTCAACCCAACCACCCAAACCTGCACCACCTCCACCTCCACCTCCACCACCTACTTCCTCCTCTCCCTCAATTCTACATACTATTCCTCCAATTTTGTTGAGGACTTGACATGGACCCTCGTTATCACCTTCATTCTCAGCATACCCATTTGCTGGCTACTCCTCCTTTTTCTCAAGCATTATACCAAACACCTTGTCTACGCTACTCTCCCCTTCTTCATCGTCATCCCCATCTTCCTCAACGTTTACTGGTTCGTTGTCTGCACTGTCAGCCCCACTTGCAGCGATGTTTTCCCCATGGTATACCGCATTCTCGTTCTCGTCTTCCTCTTCCTCGTGATTGGGGTAATCGTGTGGATCCTCGTTGCGAATTGGCACCGTGTTGAGCTCACAATCAGCATAATCGGTGTGGCATCAAACGCGCTTTCTTGGAACCTGGGTTTGTTCGGGGTGCTACCCTGTTTGACCATTGGCCTTTTGCTCTACTACGTTCCCATGGTGGTGTTCATGGTTTTCGCCACGTTTAACGGCAAAGTTGTGCCGAAAAGTTTGGAAGGTGATGAAATTGGATGTGTTTGGAAGCAGGATAGTTGGGTGCCGGCTTATTTTGCGCTGGCAATACTCACTATGCTGTGGTCCGCAACGGCGATGGTTGAGGCGCAGGTTTATGTGATCAGTGGGACTATTGCTCACTGGTATTTCTCAAAGGATGATCAAGTTCCAAGAAAGAGTATTACAAATTCTATAAGAAATGCTTTTGGTCCTTCTGTGGGCACCGTATGTTTGTCAGGATTGCTTATGTGTGTTGTCCGAATGGTTCGTTCTGCGGTTGATAGTGCTAGACAAGAGGATGCTCCGGGGATATTTAACCTGATATTGCGATGCTGTGTGAATGCCTTCCTGGCAGCAGTGGATTTTCTTAATAAGTTTACCATCAACTTTGCCGCAATAACCGGTGAGGCTTACTGCACATCTGCAAGGATGACATATGAACTTCTAAGACGTAATCTTCTGTCTGCTGTTTTTGTGGAGACCATCTCATCTCGCATCCTGGCCGGAATTATCTTTGTCCTGTCGGCAATATACACAATTGTGGTATGTGTTATATTAAAGACCACAACGAGTCTTGGGTCCGATTCATATCTAGTAGCAGCGCTAGCTTGGTTGCTGCTGATCATAGTGCTGGGATTCTTTGTGCATGTACTAGACATTGTAATCGACTCAATTTATGTCTGCTATGCCATAGACCGTGATAGCGGAGAAGTCTGCAAACAAGATGTCCATGAGGTTTATGTTCACTTGCCCATTAGCAGGAGTAGCAGACAATCTAATGTTGTAACAAGAATTCTAGGTGTGTAA 1596 0.4668 MGSNNEDPSSSPSHPLLEPHSPDSQESFIHISYNHGPRSFKDLPFFILFLLFSLSTFAFGIFSIFHRNPDYPASLSSFSFNPTTQTCTTSTSTSTTYFLLSLNSTYYSSNFVEDLTWTLVITFILSIPICWLLLLFLKHYTKHLVYATLPFFIVIPIFLNVYWFVVCTVSPTCSDVFPMVYRILVLVFLFLVIGVIVWILVANWHRVELTISIIGVASNALSWNLGLFGVLPCLTIGLLLYYVPMVVFMVFATFNGKVVPKSLEGDEIGCVWKQDSWVPAYFALAILTMLWSATAMVEAQVYVISGTIAHWYFSKDDQVPRKSITNSIRNAFGPSVGTVCLSGLLMCVVRMVRSAVDSARQEDAPGIFNLILRCCVNAFLAAVDFLNKFTINFAAITGEAYCTSARMTYELLRRNLLSAVFVETISSRILAGIIFVLSAIYTIVVCVILKTTTSLGSDSYLVAALAWLLLIIVLGFFVHVLDIVIDSIYVCYAIDRDSGEVCKQDVHEVYVHLPISRSSRQSNVVTRILGV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00898 531 Pfam Plasma-membrane choline transporter 187 497 IPR007603 GO:0022857|GO:0055085
Aip03g00898 531 PANTHER CTL-LIKE PROTEIN DDB_G0288717 28 511 - -
Aip03g00898 531 MobiDBLite consensus disorder prediction 1 23 - -
Aip03g00898 531 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 28 511 IPR007603 GO:0022857|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00898 - - gmx:100801313 706.827