Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00897 ATGGCGATGGCATTCAAGATGGCGACAACAGGGATGTGGGTGACGGATGAGTGCAAGAACTCATTCATGGAGATGAAGTGGAAGAAGGTTCACAGATACATAGTGTTCAAGATCGATGAAGGCTCAAGGCTTGTCAAAGTCGACAAGGTTGGTGCTCCCGGCGAGGGCTATGCCGATCTTGCCGCTTCCTTGCCTAAAGATGACTGCAGATATGCCGTCTTCGACTTCGATTTTGTCACGGTTGATAACTGCCGCAAAAGCAAGATATTCTTCATTGCATGGTCGCCAACGGCATCAAGGATAAGAGCTAAGATTCTATATGCAACATCGAAGGATGGTCTGAGAAGAGCATTGGATGGAATCAGCTATGAGCTTCAGGCCACGGATCCAGCTGAGATGGGATTCGATCATTTGCCCGAACTCCATTCACAACACACAAATCAAAGAAACCTAGCTAAACCTAGCGGTTTAACTTCAAATCGAAGAACTCCCTTAGCTAAACCTAGCATTCCCCTCTCCATCAACGGGCTCCTTCTTCTCTCCGTCGCACGAGCTCTTTCTTCTCCATTCCTCACCTACAGCTCCACTGCCGGCCACCCTAACTGGCGGAGCTACCTTCTCCTTCTTCTCCTCTTTTTTAAACAAAGCAAGCTCCGTGTTTTTTTCGTTCGCAGAACAAAGCAAGCTCAAGCTCCACCACCGCTATGCCTCTCTCTCTACTTTTATCCCCCTCAGTTCTGGCTCGCATACCTTCGCGCAAGCCCTAGCTTCGTGGTGACCAAAATCGGTTCCACCGTCAGTCGCGGTTCCACCTCTCTCTTTCCCCCTGTTCGAACCGATAAGTTCCTGGAGCCCCTTGAACTCTGCTATAGATCACTCTGCGCATGTGGTGACCAACCAATAGTAGATGGTAGCCTTCTTGATTTCTTGCAGCAAGTTTCCACATTTGGACTCTCAATGGTAAGACTCGACATTCGTCAAGAGTCAGACCGGCACACTGATGTCATGGATGCCATTACCAAACACTTGGAGATTGGATCATACCAAGAGTGGTCTGAGGAACGCAGGCAGGAATGGCCCCTGTCAGAGCTCAGTGGAAAGCGCCATCTGTTTGGCCCTGATCTTCCCAAAATAGAAGAGATCGCCGATGTTCTGGAAACCTTCCATGTCATTACAGAACTTCCCTTAGACAACTTTGGTGCCTACATAATCTCAATGGCAACAGCACCGTCTGATATGCTTGCTGTTGAGCTCTTACAATGGGAATGCCACGTGAAGCAACCGCTAAGGGCCGTGCCATTGTTTGAAAAGCTTGATGATCTTGAGTCTGCTCCTACTGCAGTGGCGCGGCTTTTCTCTATTGATTGGTACAGAAACCGAATCAATGGGAAGCAAGAAGTTATGATAGGATACTCAGACTCAGGAAAAGATGCCGGTCGTCTTTCTGCGACTTGGGCGCTGTACAAGGCTCAAGAGGAGCTCATAAAGGTTGCGAAGGATGTTAGTTGA 1509 0.4871 MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEGSRLVKVDKVGAPGEGYADLAASLPKDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPAEMGFDHLPELHSQHTNQRNLAKPSGLTSNRRTPLAKPSIPLSINGLLLLSVARALSSPFLTYSSTAGHPNWRSYLLLLLLFFKQSKLRVFFVRRTKQAQAPPPLCLSLYFYPPQFWLAYLRASPSFVVTKIGSTVSRGSTSLFPPVRTDKFLEPLELCYRSLCACGDQPIVDGSLLDFLQQVSTFGLSMVRLDIRQESDRHTDVMDAITKHLEIGSYQEWSEERRQEWPLSELSGKRHLFGPDLPKIEEIADVLETFHVITELPLDNFGAYIISMATAPSDMLAVELLQWECHVKQPLRAVPLFEKLDDLESAPTAVARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRLSATWALYKAQEELIKVAKDVS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00897 502 SMART adf_2 16 143 IPR002108 GO:0003779
Aip03g00897 502 ProSiteProfiles ADF-H domain profile. 11 143 IPR002108 GO:0003779
Aip03g00897 502 SUPERFAMILY Actin depolymerizing proteins 6 141 - -
Aip03g00897 502 Gene3D Severin 2 147 IPR029006 -
Aip03g00897 502 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 279 500 - -
Aip03g00897 502 Pfam Phosphoenolpyruvate carboxylase 279 500 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip03g00897 502 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 467 479 IPR033129 -
Aip03g00897 502 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 279 500 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip03g00897 502 PRINTS Phosphoenolpyruvate carboxylase signature 316 336 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip03g00897 502 PRINTS Phosphoenolpyruvate carboxylase signature 465 485 IPR021135 GO:0006099|GO:0008964|GO:0015977
Aip03g00897 502 Gene3D Phosphoenolpyruvate/pyruvate domain 262 319 - -
Aip03g00897 502 CDD ADF_cofilin_like 10 138 IPR017904 GO:0015629|GO:0030042
Aip03g00897 502 Pfam Cofilin/tropomyosin-type actin-binding protein 18 138 IPR002108 GO:0003779
Aip03g00897 502 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 276 500 IPR015813 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00897 Aip-Chr3 8581658 8587857 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00897 K01595 - aip:107632258 564.303