Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00877 ATGGCGATACAAGCACAGTTTTATTGTTCGAGTAACAACAATGATGTATCTCCGTTTTGCAACAATGGTTATTATTGTGATGATGGACTCTTTGATTCATCATCATGTTTTAATCTTCAACAACAACATCATCAGAAAGAACAATTACAATTGCAACAACGTTTGCAACAGTCATACAATGAAGATCAGATGGTTGGTTACGATGATTTTACTAATCTCTTTTATTATGATCCAAAACTCAACAACAATCACCATTCAACACCATCAAAAATTTTACCTACCTTTGCTGCTCAATATGATATACAGAGAGACCAGGTTGATCATTACATCAGATTAGAGAATGCAAAGTTGAGATTTATGCTACAAGAGCAAGATAAACAACAAGTGGCATCATTATTGAAGAAGTTTGAATCTCGATCACTCTCTATGCTGATGGAGAAAGATGAAGAGATAGCACAAGTTTCAATGAAAAGGATAGAATTGGAAAATTATTTAAGAAGACTAGAGGCAGAAAACCAAGCATGGCAAAAAGTAGCACACGAAAACGAAGCAATGGCATTGTCTTTGCACAAAACATTAGAAGAGATGAAAGAAAAAATGGTAGTGGGAACAAAGGATGAAGAATCATGTTGTGATGAAGCACACTTTGAAGAAGAACATGATAATCTTAATGATAATATCATGATGTTATGTAAAAGTTGTCATTCTAGGATTTCGTGTTATTTATTTCTTCCATGCAGGCACCTTTCTTCATGCAAAGAATGCGAGACATTTCTTGAAGCTTGTCCTGTTTGTGGAATGCAAAAAAAAGGTAGTATAGAGACTTTGATTTTCTAA 837 0.3405 MAIQAQFYCSSNNNDVSPFCNNGYYCDDGLFDSSSCFNLQQQHHQKEQLQLQQRLQQSYNEDQMVGYDDFTNLFYYDPKLNNNHHSTPSKILPTFAAQYDIQRDQVDHYIRLENAKLRFMLQEQDKQQVASLLKKFESRSLSMLMEKDEEIAQVSMKRIELENYLRRLEAENQAWQKVAHENEAMALSLHKTLEEMKEKMVVGTKDEESCCDEAHFEEEHDNLNDNIMMLCKSCHSRISCYLFLPCRHLSSCKECETFLEACPVCGMQKKGSIETLIF 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00877 278 Gene3D Death Domain, Fas 120 239 IPR011029 -
Aip03g00877 278 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 277 - -
Aip03g00877 278 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 277 IPR017066 -
Aip03g00877 278 PIRSF SBP1_RNase_bind 4 278 IPR017066 -
Aip03g00877 278 Gene3D - 240 275 - -
Aip03g00877 278 Coils Coil 151 185 - -
Aip03g00877 278 ProSiteProfiles Zinc finger RING-type profile. 231 265 IPR001841 -
Aip03g00877 278 Pfam Zinc finger, C3HC4 type (RING finger) 230 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00877 Aip-Chr3 8379696 8381083 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00877 K19042 - gmx:100789863 230.335