Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00866 ATGGCTTTCCGCATTCCAGGTATTAGAAAGGCATCACTTTCTGCATCAAAAGGGACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCTGTATGTTACTTGAACCAGCCTTCATTTCAAGAATTACTAAGCCAATCAGAAGAAGAATTTGGTTATGATCACCCAACAGGTGGTCTCACAATTCCATGCAGCGAGGATGCCTTCCTGAACCTCACTTGTCAATTAAGTGGGCAGTAA 267 0.427 MAFRIPGIRKASLSASKGTNVPKGYLAVYVGDKMRRFVIPVCYLNQPSFQELLSQSEEEFGYDHPTGGLTIPCSEDAFLNLTCQLSGQ 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00866 88 Pfam Auxin responsive protein 12 84 IPR003676 GO:0009733
Aip03g00866 88 PANTHER AUXIN-INDUCED PROTEIN 10A5 12 86 - -
Aip03g00866 88 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 12 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00866 Aip-Chr3 8325103 8325472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00866 20 78 Calmodulin-binding Proteins AT3G43120 55.932 2.49e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00866 K14488 - gmx:100806671 128.642
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00866 03 8325103 8325472 Aip03g00866 03 8325103 8325472 ECH