Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00831 ATGTCTGGTAATAGATTAATTGAGCTTATCTCATTTGATTACAAGTGGCTGTTCTATGAGCCGTTGCTTGAGATGGTGGGAACAACACTAAAGATGGGTTTCCGTTTACCTGGTATTCGAAGGGCGTCCTTCTCTGCTAACCAAGCATCTTCAAGATCCTTGGAAGTCCCAAAGGGGTATCTTGCAGTGTATGTTGGAGAGAAACAGAAGCGTTTTGTAATTCCCATATCATATCTGAACCAACCATCATTTCAAGACTTGTTGAGTCAAGCTCAGGAAGAGTTTGGATATGATCATCCCATGGGTGGTCTCACTATTCCTTGCAGCGAATATGTCTTCCAACAGATCACTTCTCAGCTTGAATAG 366 0.4235 MSGNRLIELISFDYKWLFYEPLLEMVGTTLKMGFRLPGIRRASFSANQASSRSLEVPKGYLAVYVGEKQKRFVIPISYLNQPSFQDLLSQAQEEFGYDHPMGGLTIPCSEYVFQQITSQLE 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00831 121 Pfam Auxin responsive protein 40 118 IPR003676 GO:0009733
Aip03g00831 121 PANTHER AUXIN-INDUCED PROTEIN 6B 32 121 - -
Aip03g00831 121 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 32 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00831 Aip-Chr3 8060076 8060682 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00831 55 121 Calmodulin-binding Proteins AT3G43120 49.254 2.37e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00831 K14488 - gmx:100816803 158.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00831 03 8060076 8060682 Aip03g00831 03 8060076 8060682 ECH