Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00804 ATGAAGGGAGTGTTTGTAGTTGCGCTCATTGCATTTGCATTCTTGATGGCTGCGAAGTTAGCGAGTGGAAGTCACGACTACCAAGACGCGTTGACGAAGGCAGTACTGTTCTTTGAAGGGCAGAGGTCAGGGTTCTTGCCGCAGGACCAGAGGATGAGCTGGCGTAGCAACTCCGGACTCAGCGACGGATGGACCTACAACGCCGATCTCGTCGGCGGTTACTACGACGCCGGCGACAACATCAAGTTTGGGTTTCCGATGGCATTCACCACCACTATGCTCGCTTGGAGCGTCCTTGAGTTCGGTGCCATCATGCCTCCCAATGAACTCAGAAACGCAATGCTTGCAATCCGTTGGGCTACTGATTACTTGCTCAAGACCGTTTCTCAGCCTAATCGAATTTTTGTTCAGGTGGGGGATCCACGCTCAGACCATGATTGTTGGGAGAGGCCTGAGGACATGGACACAGCCAGGACGGTGTACGCTGTTGATGCCCCAAACGCGGCTTCTGATGTTGCCGGTGAAACCGCGGCCGCGCTTGCAGCCTCATCCTTGGTATTCTGGTCAACTGACCCGGGTTATGCAGAAACATTGTTACGGAATGCTATTAGTGCCTTCCAATTTGCAGATAACTACAGGGGTGCTTACAGTGACAATGCCAATGTTAAGTATAGTGCTTGCCCATATTATTGTGATTTTGATGGATATCAGGACGAGTTATTGTGGGGTGCGGCATGGCTAAGAAGGGCCACGAAGGATGATAATTTCCTCAACTACCTTCAAACCAATGGCAAAACGCTTGGTGCTGACGACAACATCAATGAATTTGGTTGGGACAACAAGCATGCTGGCCTCAATGTTCTTGTCTCCAAGGAAGTCCTTGAAGGAAATCTATACTCACTTGAATCCTTCAAGGCGTCAGCCGATAGCTTCATGTGCACGCTCATACCCGAATCTCCTAGCTCACACATAGAGTACACTCCTGGTGGACTTTTGTTTAGGCCCGGAGGGAGTAACTTGCAACATGCTACTTCAATTTCATTCCTTGAGTTGGTTTATGCTAATTACTTGGATCACACGTCACAGTCCCTCAATTGTGGGAATGTTGTGGTTAGCGCTCAAACACTTCGGCAACATGCTAAGAGGCAAGTTGATTACATTCTGGGTGATAATCCAATGGGGTTATCGTACATGGTTGGATATAGCAACTACTATCCGCAGCGCATTCATCACCGTGGCTCCTCTTTACCTTCCATCAAGGATCATCCTCAGTTTATTGCATGCAAGGAAGGTTCAACGTACTACAACTCCACTGATCCAAACCCAAATGTGCTTGTGGGAGCCATCGTTGGAGGACCTGGGGAAGATGATGTGTATGTGGATAATAGGGATGATTTTAGAAAATCCGAGCCAACCACATACATCAATGCACCATTTATTGGTGTTCTAGCATATTTTGCTGCTAATCCTAACTTCAGTTAA 1482 0.4804 MKGVFVVALIAFAFLMAAKLASGSHDYQDALTKAVLFFEGQRSGFLPQDQRMSWRSNSGLSDGWTYNADLVGGYYDAGDNIKFGFPMAFTTTMLAWSVLEFGAIMPPNELRNAMLAIRWATDYLLKTVSQPNRIFVQVGDPRSDHDCWERPEDMDTARTVYAVDAPNAASDVAGETAAALAASSLVFWSTDPGYAETLLRNAISAFQFADNYRGAYSDNANVKYSACPYYCDFDGYQDELLWGAAWLRRATKDDNFLNYLQTNGKTLGADDNINEFGWDNKHAGLNVLVSKEVLEGNLYSLESFKASADSFMCTLIPESPSSHIEYTPGGLLFRPGGSNLQHATSISFLELVYANYLDHTSQSLNCGNVVVSAQTLRQHAKRQVDYILGDNPMGLSYMVGYSNYYPQRIHHRGSSLPSIKDHPQFIACKEGSTYYNSTDPNPNVLVGAIVGGPGEDDVYVDNRDDFRKSEPTTYINAPFIGVLAYFAANPNFS 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00804 493 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 386 412 IPR018221 -
Aip03g00804 493 Pfam Glycosyl hydrolase family 9 27 483 IPR001701 GO:0004553|GO:0005975
Aip03g00804 493 PANTHER ENDOGLUCANASE 24 7 492 - -
Aip03g00804 493 SUPERFAMILY Six-hairpin glycosidases 23 489 IPR008928 GO:0005975
Aip03g00804 493 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 459 477 IPR033126 -
Aip03g00804 493 PANTHER ENDO-1,4-BETA-GLUCANASE 7 492 - -
Aip03g00804 493 Gene3D - 24 489 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00804 Aip-Chr3 7802137 7805835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00804 4 489 Glycoside Hydrolase AT1G70710 59.465 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00804 K01179 - gmx:100101849 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00804 03 7802137 7805835 Aip03g00804 03 7802137 7805835 ECH