Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00771 ATGGCTAGTATCCCCAATGGCAATGGCAACGGCAACGGCAACAGTAATGTCGGTCTACAGCCTGATCTGCCGCGGAGGACTTACCAAGCAGTAGTGGCTGCGACTCGAGATATGGGAATTTCCAAGGATGGGAAAATGCCCTGGAACTTGCCTTCTGATCTCAAGTTCTTTCAGGAGATCACAACAACAACATCTGATTCTGGGAAGAAGAATGCTGTTGTGATGGGTAGAAAAACATGGGAGAGTATCCCTCCCGAGAAGAGGCCCCTTTCTGGTCGACTTAATGTTGTTCTGACTCGCTCTGGTAGTTTCGATATAGCTACAGCAGAGAATGTTGTTATATGTGGAAGTCTGTCTTCTGCTATGGAACTGTTGGCTGCATCTCCTTACTGTCTTTCAATTGAGAAAGTATTTCTTACAGGAGGTGGAGAGATATTTAGGGAGGCTCTTAATGCACCTGGATGTGAGGCTGTGCATATTACAGAAATTGAAGAACGCATTGAGTGCGACACTTTTATCCCTCAAATTGATACCTCCATGTTTCAGCCATGGTACTCATATTTTCCTTTGGTGGAAGACAACATTCGCTATTCTTTCACCACTTTTGTACGTGTGAGAAACTCTGCATTGGAGTCCCTGAGTCAGAATACTCATTCAGATTTTGATAATAGTTCAGACTCTAGAAAGTTTGAAGTTCAGAAATTTTCTTTTCTTCCTAAAATGATTTTTGAGAGACATGAAGAGTACAAGTACCTTAGACTGGTTCAAGAAATCATTTCTGAAGGTACAACTAAGGATGATAGGACAGGGACTGGTACCTTGTCCAAATTTGGTTGCCAGATGAGGTTCAATCTGCGCAGAAGCTTTCCTCTTCTGACAACTAAGAGAGTATTTTGGCGTGGGGTTGTTGAAGAGCTTCTTTGGTTTATCAGTGGTTCAACAAGTGCTAAGGTTCTGCAAGATAAAGGCATTCATATATGGGATGGCAATGCTTCCAGAGAATACCTTGATAGCATTAGTTTGACAGACAGGGAGGAGGGTGACTTAGGACCTGTTTATGGGTTTCAGTGGAGGCACTTTGGTGCCAGGTATACAGACATGCATGCTGATTACTCTGGTCAAGGATTTGATCAGCTTTTAGATGTTATTAACAAGATAAAGCATAATCCTGATGATCGACGGATCATTCTCTCAGCGTGGAATCCAGCTGATCTTAAATTGATGGCTCTTCCACCCTGCCACATGTTTGCGCAGTTTTATGTAGCAAATGGGGAGCTCTCGTGTCAAATGTACCAGCGATCTGCTGATATGGGCCTGGGTGTGCCATTTAATATTGCATCTTATGCACTCTTGACATGCATGATTGCTCATGTTTGTGATCTTGTACCAGGTGATTTTATCCATGTTATTGGGGATGCACATGTTTACCGCAATCATGTGAGACCTTTGCAGGAACAGCTCCAAAACCATCCTAAACCTTTTCCGATTTTGAAGATAAACCCAAAGAAGAAGGATATAGATTCTTTTGTGGCAGCTGATTTCAATCTCATAGGCTATGATCCTCACCAAAAAATTGAAATGAAGATGGCTGTTTAG 1596 0.4254 MASIPNGNGNGNGNSNVGLQPDLPRRTYQAVVAATRDMGISKDGKMPWNLPSDLKFFQEITTTTSDSGKKNAVVMGRKTWESIPPEKRPLSGRLNVVLTRSGSFDIATAENVVICGSLSSAMELLAASPYCLSIEKVFLTGGGEIFREALNAPGCEAVHITEIEERIECDTFIPQIDTSMFQPWYSYFPLVEDNIRYSFTTFVRVRNSALESLSQNTHSDFDNSSDSRKFEVQKFSFLPKMIFERHEEYKYLRLVQEIISEGTTKDDRTGTGTLSKFGCQMRFNLRRSFPLLTTKRVFWRGVVEELLWFISGSTSAKVLQDKGIHIWDGNASREYLDSISLTDREEGDLGPVYGFQWRHFGARYTDMHADYSGQGFDQLLDVINKIKHNPDDRRIILSAWNPADLKLMALPPCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAHVYRNHVRPLQEQLQNHPKPFPILKINPKKKDIDSFVAADFNLIGYDPHQKIEMKMAV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00771 531 PIRSF DHFR-TS 14 531 IPR012262 GO:0004146|GO:0004799|GO:0006730
Aip03g00771 531 Gene3D Dihydrofolate Reductase, subunit A 16 205 IPR024072 -
Aip03g00771 531 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 240 531 IPR036926 -
Aip03g00771 531 PANTHER THYMIDYLATE SYNTHASE 1 8 531 IPR045097 GO:0016741
Aip03g00771 531 Pfam Dihydrofolate reductase 29 203 IPR001796 GO:0004146|GO:0046654
Aip03g00771 531 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 200 531 IPR036926 -
Aip03g00771 531 SUPERFAMILY Dihydrofolate reductase-like 24 205 IPR024072 -
Aip03g00771 531 CDD DHFR 30 203 IPR001796 GO:0004146|GO:0046654
Aip03g00771 531 PANTHER BIFUNCTIONAL DIHYDROFOLATE REDUCTASE-THYMIDYLATE SYNTHASE 8 531 - -
Aip03g00771 531 ProSiteProfiles Dihydrofolate reductase (DHFR) domain profile. 27 204 IPR001796 GO:0004146|GO:0046654
Aip03g00771 531 CDD TS_Pyrimidine_HMase 251 484 IPR023451 -
Aip03g00771 531 MobiDBLite consensus disorder prediction 1 22 - -
Aip03g00771 531 Hamap Thymidylate synthase [thyA]. 248 531 IPR000398 GO:0004799|GO:0006231
Aip03g00771 531 Pfam Thymidylate synthase 250 531 IPR023451 -
Aip03g00771 531 ProSitePatterns Thymidylate synthase active site. 393 421 IPR020940 GO:0004799|GO:0006231
Aip03g00771 531 PRINTS Thymidylate synthase family signature 289 310 IPR000398 GO:0004799|GO:0006231
Aip03g00771 531 PRINTS Thymidylate synthase family signature 382 401 IPR000398 GO:0004799|GO:0006231
Aip03g00771 531 PRINTS Thymidylate synthase family signature 408 423 IPR000398 GO:0004799|GO:0006231
Aip03g00771 531 PRINTS Thymidylate synthase family signature 426 452 IPR000398 GO:0004799|GO:0006231
Aip03g00771 531 PRINTS Thymidylate synthase family signature 464 481 IPR000398 GO:0004799|GO:0006231
Aip03g00771 531 TIGRFAM thym_sym: thymidylate synthase 250 531 IPR000398 GO:0004799|GO:0006231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00771 Aip-Chr3 7445253 7450204 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00771 K13998 - gmx:100786311 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00771 03 7445253 7450204 Aip03g00771 03 7445253 7450204 ECH