Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00736 ATGATTGTGAGAGTGATGGAAGAGAAACTTATACAGAGGTTGGAATCCGCGGTGTCGCGCTTGGAGGCTCTATCCTCCGGATCACATGGCGGAGCTTTCACGGCCGGTGGTGGTGGTGCCGATGATGCGGCGCGAGATCCGTCCGTCGTGGCATTCGGCGATCTTATTGATGAGCACCTAAGTAAGCTCTCTGCTGCGGCGGAGGTCATCGGAGGTCAGGTGTTGGGTATCAGCAACGTTGTGAAGGAAGCTTTCGCCGCGCAGAAGGAGCTTCTGATTACGCTCAAGCACACTCAGAAGCCCAGCCCTCAGGGAATGGCTGAATTTCTGAAACCATTGAATGACATTATCAAAAAAGCTAACGCAATGGCAGAAGGAAAGAGATCTGATTATTTCAATCACTTGAAGGCTGCTGGAGACAGTCTCTCAGCTCTAGCATGGATTGCATATACAGGGAAGGAATGTGGTATGAGTATGCCTATTGCGCACGTGGAAGACAGTTGGCAGATGGCTGAGTTTTATAGCAACAAGGTCCTTGTCGAGTACAGAAATAAAGACCCAAATCATGTTGAGTGGGTCAAAGCTCTGAAAGATTTATATGTACCTGGCTTGAGGGATTATGTCAAGAAATTTCATCCTTTAGGCCCTGTATGGAGTCCAACAGGAAAAGTAATTGCTGCATCAAAAGCTCCTTCATCTAATTCACCTGCTGCCCCTCCTCCTCCACCTGCTTCTCTCCTTAGTTCTGAAACATCTCGGGCTTCATGTTCTAAGCCAAATGTAGGGATGTCTGCTGTTTTTCAACAGATCAGTTCAGGAGATATTACTTCAGGTTTGAGAAAGGTTACAAATGACATGAAAGCAAAGAATCGAACGGATAGAACTGGAGTTGTTGGAACTACTGAAAAAGAAAGTCATGCAGCTCCAAAGGCAACTCCTAAAGCAGGACCTCCGAAATTTGAGCTTCAAATGGGCCGCAAGTGGGTTGTTGAAAATCAAATTGAGAATAAATCTTTGGTCATTGAAGATTGTGATGCAAAGCAGTCTGTATATGTCTATGGATGCAAGAACTCTGTTTTACAGATTCAAGGCAAGGTCAACAATATAACCGTTGACAAATGCATTAAGATGGGAGTTGTGTTTAAGGATGTTGTTGCAGCTTTTGAGGTCGTAAACTGTAGTTCGATAGAGGTGCAGTGTCAGGGTTCCGCTCCAACAATTTCCGTGGACAATACTGGAGGCTGCCAGCTTTATCTGAGCAAGGATTCTTTAGAAACATCCATATCAACGGCAAAGTCAAGTGAGATTAATGTAATGGTTCCTGGTGCTGAGCCTGATGGTGATTGGGTGGAGCATGCTTTGCCCCAACAATATATCCATGTGTTCAAGGATGGTCGTTTTGAAACAACTCCAGCTTCTCACTCTGGAGGCTAA 1434 0.4547 MIVRVMEEKLIQRLESAVSRLEALSSGSHGGAFTAGGGGADDAARDPSVVAFGDLIDEHLSKLSAAAEVIGGQVLGISNVVKEAFAAQKELLITLKHTQKPSPQGMAEFLKPLNDIIKKANAMAEGKRSDYFNHLKAAGDSLSALAWIAYTGKECGMSMPIAHVEDSWQMAEFYSNKVLVEYRNKDPNHVEWVKALKDLYVPGLRDYVKKFHPLGPVWSPTGKVIAASKAPSSNSPAAPPPPPASLLSSETSRASCSKPNVGMSAVFQQISSGDITSGLRKVTNDMKAKNRTDRTGVVGTTEKESHAAPKATPKAGPPKFELQMGRKWVVENQIENKSLVIEDCDAKQSVYVYGCKNSVLQIQGKVNNITVDKCIKMGVVFKDVVAAFEVVNCSSIEVQCQGSAPTISVDNTGGCQLYLSKDSLETSISTAKSSEINVMVPGAEPDGDWVEHALPQQYIHVFKDGRFETTPASHSGG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00736 477 Pfam Adenylate cyclase associated (CAP) C terminal 317 474 IPR013912 GO:0003779|GO:0007010
Aip03g00736 477 Gene3D - 48 223 IPR036222 -
Aip03g00736 477 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 48 243 IPR036222 -
Aip03g00736 477 ProSitePatterns CAP protein signature 1. 10 22 IPR018106 -
Aip03g00736 477 MobiDBLite consensus disorder prediction 290 319 - -
Aip03g00736 477 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 317 476 IPR036223 -
Aip03g00736 477 ProSiteProfiles C-CAP/cofactor C-like domain profile. 317 454 IPR017901 -
Aip03g00736 477 Pfam Adenylate cyclase associated (CAP) N terminal 8 65 IPR013992 GO:0003779|GO:0007010
Aip03g00736 477 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 6 477 IPR001837 GO:0003779|GO:0007010
Aip03g00736 477 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 6 477 - -
Aip03g00736 477 Coils Coil 4 24 - -
Aip03g00736 477 Gene3D - 316 476 IPR016098 -
Aip03g00736 477 MobiDBLite consensus disorder prediction 227 255 - -
Aip03g00736 477 SMART carp 355 392 IPR006599 -
Aip03g00736 477 SMART carp 393 430 IPR006599 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00736 Aip-Chr3 7075280 7079024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00736 K17261 - gmx:100780824 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00736 03 7075280 7079024 Aip03g00736 03 7075280 7079024 ECH