Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00731 ATGAATCAATATGTGAATAAGAAGTTTAGCAACCAGTACAAGGCAACCATTGGAGCGGACTTTTTAACAAAGGAGGTGCAATTTGAAGATAGGCTTTTCACCTTGCAGATTTGGGATACAGCTGGTCAGGAAAGATTCCAAAGCCTAGGAGTTGCTTTCTACCGTGGGGCTGATTGCTGTGTTCTTGTATATGATGTTAATTCAATGAAATCATTCGACAACCTTAACAACTGGAGGGAGGAATTTCTGATTCAGGCTAGTCCTTCCGATCCAGAGAATTTTCCTTTTGTTGTTATAGGAAACAAGGTAGATATTGATGGTGGAAACAGTAGAGTGGTTTCGGAAAAGAAGGCTCGGGCTTGGTGTGCATCAAAAGGAAATATCCCATATTTTGAGACATCTGCCAAGGAAGGTATTAACGTTGAAGAAGCATTCCAGTGCATAGCCAAGAATGCCCTGAAAAGTGGGGAAGAAGAGGAATTATACCTACCCGACACAATTGATGTTGGAACCAGCAGTCAGCAACGGGCAACAGGTTGTGAATGCTGA 549 0.4226 MNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVIGNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEEELYLPDTIDVGTSSQQRATGCEC 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00731 182 SMART ran_sub_2 1 177 - -
Aip03g00731 182 PRINTS Transforming protein P21 ras signature 92 105 - -
Aip03g00731 182 PRINTS Transforming protein P21 ras signature 130 152 - -
Aip03g00731 182 PRINTS Transforming protein P21 ras signature 8 24 - -
Aip03g00731 182 PRINTS Transforming protein P21 ras signature 26 48 - -
Aip03g00731 182 ProSiteProfiles small GTPase Ras family profile. 1 182 IPR001806 GO:0003924|GO:0005525
Aip03g00731 182 TIGRFAM small_GTP: small GTP-binding protein domain 2 148 IPR005225 GO:0005525
Aip03g00731 182 SMART rab_sub_5 1 155 - -
Aip03g00731 182 Pfam Ras family 2 153 IPR001806 GO:0003924|GO:0005525
Aip03g00731 182 PANTHER RAB FAMILY 1 182 - -
Aip03g00731 182 PANTHER BNAA01G26470D PROTEIN 1 182 - -
Aip03g00731 182 SMART rho_sub_3 1 155 IPR001806 GO:0003924|GO:0005525
Aip03g00731 182 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 158 IPR027417 -
Aip03g00731 182 Gene3D - 1 164 IPR027417 -
Aip03g00731 182 SMART ras_sub_4 1 155 - -
Aip03g00731 182 CDD Rab7 1 158 - -
Aip03g00731 182 ProSiteProfiles small GTPase Rab1 family profile. 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00731 Aip-Chr3 7045243 7049262 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00731 K07897 - gmx:100305642 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00731 03 7045243 7049262 Aip03g00731 03 7045243 7049262 ECH