Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00711 ATGATTGGACGCAGAGAAGGAGCATTGATGAGGAACAACGGTTCCCATTCTCTTTGGAAATCGAAGGTTGTAACCGCCGTAGCAATTGGGGTCCTCATTGGTTGCGTCTTCGCGTTCTTGTTCCCAAATGGTTTCTTCTACTCTGTTCCCACTTCAACCCCAAATCGCCACCTTTCTCTTGCCGGATCCAAAACCCAGGAAAATCCAGCTGAATGTGAATCCTCTGATCGGCTCAACATGTTGAAATCAGAGTTGGTGGCAGTATCAGATAAAAATGCTGAGCTGAAAAAACAGGTGAGGGAATTGACAGAGAGGCTGCGGTTTGCGGAGCAAGGGAAAGATCAGGCTCAAAAGCAGTTTCTTGCATTGGGTAAACAGCAAAAAGCTGGACCTTTTGGTACCGTCAAGGGATTAAGAACTAACCCTACTGTTGTTCCTGATGAATCCGTGAACCCAAGGTTGGCAAAGCTATTACAGAAAATCGCAGTTAAACAAGAGCTTATAGTTGCGCTTGCAAACAGAAATGTGAAGGAAATGCTGGAGGTCTGGTTCACCAACATCAAGAGAGTAAACATAACCAATTATCTGGTTGTTGCTTTAGATGAAGAGATTGAACAGTTCTGCCAATCAAATCAAGTCCCAGTGTATAAGAGAGATCCGGATGCAGCTGTTGATAACATTGGCAAGACAGGAGGGAACCATAAGGTCTCAGGGCTTAAATTCCGTATTCTAAGAGAATTTTTGCAGTTGGGGTATGGTGTTCTTCTATCAGATGTGGACATTGTATATTTGCAAAATCCCTTCGATCATCTATATCGGGATTCAGATGTGGAGTCCATGAGTGATGGCCATGATAACAGGACGGCTTACGGTTATAACGATGTCTTTGATGAACCTGCAATGGGTTGGGCTCGATATGCACATACCATGAGGATATGGGTGTACAACTCTGGTTTCTTCTATATCAGACCAACAATTCCCTCCATTGAACTTTTGGATCGTGTGGCAACTCGACTTTCCCAGGAGGATGCATGGGACCAGGCAGTTTTCAACGAGGAGCTCTTTTTCCCCTCGCATCCAGGCTATGAAGGGCTACATGCTGCAAGAAGAACTATGGATATGTATCTGTTCATGAACAGCAAGGTTCTTTTCAAGACAGTGAGGAATGATGCTAAGCTAAGCAAGTTGAAACCGGTAATTGTTCATGTGAATTACCACCCTGATAAGCTTCCGCGAATGAAAGCGGTTGTCGAATTCTATGTCAACGGGAAGCAGGATGCTCTCAAAGCTTTCCCTGAAGGCTCAAATTGGTAA 1314 0.4444 MIGRREGALMRNNGSHSLWKSKVVTAVAIGVLIGCVFAFLFPNGFFYSVPTSTPNRHLSLAGSKTQENPAECESSDRLNMLKSELVAVSDKNAELKKQVRELTERLRFAEQGKDQAQKQFLALGKQQKAGPFGTVKGLRTNPTVVPDESVNPRLAKLLQKIAVKQELIVALANRNVKEMLEVWFTNIKRVNITNYLVVALDEEIEQFCQSNQVPVYKRDPDAAVDNIGKTGGNHKVSGLKFRILREFLQLGYGVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHDNRTAYGYNDVFDEPAMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSQEDAWDQAVFNEELFFPSHPGYEGLHAARRTMDMYLFMNSKVLFKTVRNDAKLSKLKPVIVHVNYHPDKLPRMKAVVEFYVNGKQDALKAFPEGSNW 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00711 437 PANTHER GLYCOSYLTRANSFERASE 1 436 - -
Aip03g00711 437 Coils Coil 78 119 - -
Aip03g00711 437 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Aip03g00711 437 PANTHER ARABINOSYLTRANSFERASE RRA3 1 436 IPR044290 GO:0016757|GO:0080147
Aip03g00711 437 Pfam Nucleotide-diphospho-sugar transferase 192 410 IPR005069 -
Aip03g00711 437 SUPERFAMILY Nucleotide-diphospho-sugar transferases 168 367 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00711 Aip-Chr3 6831156 6833835 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00711 K20783 - gmx:100804189 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00711 03 6831156 6833835 Aip03g00711 03 6831156 6833835 ECH