Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00709 ATGGGGAAAGGAAATGGTTGCATACCGAGCAAGTCCAAGAAGGTACCGGTGCCGGTTTCCGAGCCGGAAAATATCCAAGAACCGGTTAGCGGCGTGGACGAGAGAGCGATCGCGACTACTAGTACGAGCCGAGAAGTGGCGCCACCGGCGAGAGAAGCAAACAAGAATCTGAAAGTGTTCATTGTTTTCTACTCAATGTACGGTCACGTGGAATCACTGGCGAGATCGATGAAGAAAGGAGTTGAAACCATTGAAGGAGTTGAAGGAGTGTTGTACAGAGTGACGGAGACGCTTCCAAAGGAGGTTCTGGAAGCGATGCAGGCGCCGGAGAAGGATGACGCGGTGCCGCTGATAACGGCGGAGAAGCTGGTGGAGGCGGATGGGTTGCTGTTTGGGTTTCCGACTCGGTTTGGGAGCATGGCGGCGCAGATGAAAGGCTTCTTTGATTCCACGGGGCAGTTGTGGAAGGAGCAGAAGCTTGCCGGTGTTCCTGCCGGATTCTTTGTCAGCACCGGCACTCAGGGTGGCGGCCAAGAAACCACCGCTTGGACAGCAATAACACAGTTAGTCCACCATGGAATGCTCTATGTTCCAATTGGTTATACCTTTGGTGCTGGAATGTTTGGAATGGATTCCATCAAAGGAGGAACACCTTATGGTGCTGGAACTTTTGCTGGTGATGGTTCAAGGCAAGCAAGTGAAACAGAGTTAGCCACTGCTGAGTATCAAGGCAAGTACATGGCCACAATTGTCAAGAAATTAGCCAACAAGGATTAG 777 0.5161 MGKGNGCIPSKSKKVPVPVSEPENIQEPVSGVDERAIATTSTSREVAPPAREANKNLKVFIVFYSMYGHVESLARSMKKGVETIEGVEGVLYRVTETLPKEVLEAMQAPEKDDAVPLITAEKLVEADGLLFGFPTRFGSMAAQMKGFFDSTGQLWKEQKLAGVPAGFFVSTGTQGGGQETTAWTAITQLVHHGMLYVPIGYTFGAGMFGMDSIKGGTPYGAGTFAGDGSRQASETELATAEYQGKYMATIVKKLANKD 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00709 258 SUPERFAMILY Flavoproteins 58 254 IPR029039 -
Aip03g00709 258 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 58 254 IPR010089 GO:0003955|GO:0010181
Aip03g00709 258 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 12 257 - -
Aip03g00709 258 Pfam NADPH-dependent FMN reductase 73 199 IPR005025 GO:0016491
Aip03g00709 258 Gene3D - 54 256 IPR029039 -
Aip03g00709 258 PANTHER NAD(P)H:QUINONE OXIDOREDUCTASE, TYPE IV PROTEIN 12 257 - -
Aip03g00709 258 MobiDBLite consensus disorder prediction 1 28 - -
Aip03g00709 258 ProSiteProfiles Flavodoxin-like domain profile. 59 247 IPR008254 GO:0010181
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00709 Aip-Chr3 6797294 6800575 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00709 K03809 - gmx:100803804 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00709 03 6797294 6800575 Aip03g00709 03 6797294 6800575 ECH
Aip03g00709 03 6797294 6800575 Aip05g00767 05 9968705 9971254 ECH