Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aip03g00707 | ATGGAGGGATACACTAAGAAGGTTATGATGATAATAATGTTGGTGATTTGCATGATAGGGTCAATGGCGAATGGTCAAGGCTCGTTTTGCAAGATGCCAATAAGTGGTTTGAATGATTGTAAGCCAAGTGTGAGTAGCAGTGTAGCCAATCCAGTGGATCCATCATTCAACTCTCCTTGCTGTAAGGCAGTGAGAGGTGCTGATCTTGATTGCTTGTGCGGTTACAAGGACTCTCCTTACTTGCGTGTCTATGGTATTGACCCTACCAAGGCCATGCAACTTCCTATCAAGTGCAAGGCTAAAGATCCCTCATGGAGTTGCTAG | 324 | 0.4475 | MEGYTKKVMMIIMLVICMIGSMANGQGSFCKMPISGLNDCKPSVSSSVANPVDPSFNSPCCKAVRGADLDCLCGYKDSPYLRVYGIDPTKAMQLPIKCKAKDPSWSC | 107 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aip03g00707 | 107 | Pfam | Probable lipid transfer | 11 | 107 | IPR016140 | - | |
| Aip03g00707 | 107 | CDD | nsLTP_like | 30 | 107 | IPR044741 | - | |
| Aip03g00707 | 107 | Gene3D | - | 28 | 105 | IPR036312 | - | |
| Aip03g00707 | 107 | SUPERFAMILY | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 30 | 106 | IPR036312 | - | |
| Aip03g00707 | 107 | SMART | aai_6 | 30 | 107 | IPR016140 | - | |
| Aip03g00707 | 107 | PANTHER | LIPID-TRANSFER PROTEIN DIR1-RELATED | 1 | 102 | - | - | |
| Aip03g00707 | 107 | PANTHER | LIPID BINDING PROTEIN-RELATED | 1 | 102 | IPR039265 | GO:0005504|GO:0009627 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aip03g00707 | 29 | 98 | Acyl Lipid Metabolism Gene Families | AT5G48485 | 50.000 | 3.28e-17 | 68.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aip03g00707 | - | - | aprc:113865173 | 104.76 |