Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00704 ATGGCAGTTCTTAAATCTGTAGGTGCAGATTTCGACGAAAAGCATCATGCTTTAGCTCCATTGAGGGTTTTAAGGGGCCTGATCTGTTTGTTGGTGCTGTTTTCAACAGCATTTGTAATGTTAGTCTTCTTTGGCTTCAATGGTGCTGTTATAGTTCGACTTTTTAGCATGAAATACAGCAGAAGAGCAACTTCCTTTTTCTTTGGTGCTTGGTTAGCTTTGTGGCCTTTTCTGTTTGAAAAGATCAACAAGACTAAAGTTGTGTTTTCTGGAGATATTGTTCCTTCTAGAGAAAGAATCTTGCTGATTGCAAATCATAGAACCGAGGTTGACTGGATGTATTTATGGGACCTTGCGTTGCGGAAAGGATGTGTCGGATACATAAGATATATACTTAAGAGCAGCTTGATGAAACTTCCGGTTTTTGGTTGGGCATTTCACATATTAGAGTTCATTCCGGTGGAAAGGAAGTGGGAGGCCGATGAATCAACCTTGCGCCATATGCTTTCAACATTCAAGGATCCTCAAGATCCTCTTTGGCTTGCTCTTTTCCCAGAAGGCACCGATTTTACTGAGCAGAAGTGTATTCGGAGTCAAAAGTATGCTGCAGAACATGGGTTACCGATTCTGAAAAATGTTTTACTTCCAAAGACAAAGGGCTTCTGCACCTGCTTGCGAGAGTTGAGAGGTTCTCTGACTGCAGTTTATGACGTGACCATTGGCTACAAATACCGGTGCCCAACTTTCTTGGACAATGTCTTTGGGGTGGAACCTTCAGAAGTTCATATGCACATCCGCCGATTTCCCCTTGATTGCATACCGGAATCTGAACAGGAAATTTCCATGTGGTTGGTAGATAGATTCAAAGTAAAGGACCATCTGCTTGCGAATTTTCAATCTCAAGGTCAGTTTCCTGATCAAGCAACCGAATTGGACTTGCCTACTGCAAAAAGCTTTCTGAATTGTATCACAGTTATTATGGTGACCGGCACATGCATATACTACACTTTCTCCTGTGTCTGGTTCAAACTCTATGTGTCTTTAGTCTGCGCTTATTTGATTCCGGCAACATCTTTCAATATTCGGCCTCAACCGATTCTCAGCTTTCTGAAGATGAGATCTAAGTGTCACCCTTAG 1137 0.4213 MAVLKSVGADFDEKHHALAPLRVLRGLICLLVLFSTAFVMLVFFGFNGAVIVRLFSMKYSRRATSFFFGAWLALWPFLFEKINKTKVVFSGDIVPSRERILLIANHRTEVDWMYLWDLALRKGCVGYIRYILKSSLMKLPVFGWAFHILEFIPVERKWEADESTLRHMLSTFKDPQDPLWLALFPEGTDFTEQKCIRSQKYAAEHGLPILKNVLLPKTKGFCTCLRELRGSLTAVYDVTIGYKYRCPTFLDNVFGVEPSEVHMHIRRFPLDCIPESEQEISMWLVDRFKVKDHLLANFQSQGQFPDQATELDLPTAKSFLNCITVIMVTGTCIYYTFSCVWFKLYVSLVCAYLIPATSFNIRPQPILSFLKMRSKCHP 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00704 378 CDD LPLAT_LCLAT1-like 76 266 - -
Aip03g00704 378 Pfam Acyltransferase C-terminus 254 323 IPR032098 -
Aip03g00704 378 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 28 214 - -
Aip03g00704 378 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5-RELATED 1 373 - -
Aip03g00704 378 Pfam Acyltransferase 91 243 IPR002123 GO:0016746
Aip03g00704 378 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 373 - -
Aip03g00704 378 SMART plsc_2 100 222 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00704 Aip-Chr3 6764676 6768720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00704 1 365 Miscellaneous Gene Families AT1G75020 59.783 2.01e-157 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00704 K13513 - gmx:100814885 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00704 03 6764676 6768720 Aip03g00704 03 6764676 6768720 ECH