Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00682 ATGGATGAATTACCTGGCTCTGTGGGCACCAGTGCCAGCTTCAGCCTCAGATTGGGCCAGGCTATTTTCTCATCTTCTTCACTCCTCTTTATGTCTTTGGGAGTTGAATTCTACAGCTACACAGCTTTCTGCTATTTGGTAACAATTATGGGATTGGTGATACCTTGGAGCTTCACATTAGCATTGGTTGATGGATATTCAGTTCTTGTCAAATGCCCTATTCGTCAACCAGGAATTCTCATGATTATTGTTGTTGGAGATTGGATATTATCAACACTGACATTAGCAGCAGCTTGCTCAACAGCTAGTGTTGTGGATCTCTTGCTCCATTCCCATGGCAATTTTTGTCCTCCAAAGCTTTGCAGCAGGTACAGGATATCTGCAATCATGGCCTTCTTCTCATGGTTTCTGTCTTTGGCATCCTCTCTTTTCAATCTTTGGCTATTACCCTCTTTGTAA 459 0.427 MDELPGSVGTSASFSLRLGQAIFSSSSLLFMSLGVEFYSYTAFCYLVTIMGLVIPWSFTLALVDGYSVLVKCPIRQPGILMIIVVGDWILSTLTLAAACSTASVVDLLLHSHGNFCPPKLCSRYRISAIMAFFSWFLSLASSLFNLWLLPSL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00682 152 Pfam Casparian strip membrane protein domain 9 137 IPR006702 -
Aip03g00682 152 PANTHER CASP-LIKE PROTEIN 5B3 1 151 IPR045009 -
Aip03g00682 152 PANTHER CASP-LIKE PROTEIN 5C3 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00682 Aip-Chr3 6644062 6645975 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00682 - - gmx:100810360 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00682 03 6644062 6645975 Aip03g00682 03 6644062 6645975 ECH