Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00679 ATGGAGGAAGCATACATTGTGAAGGTGGAGGAAGGAAAAGAAGCCACTCATGATAAGCCTTCAGCAGGTCCAGTGTACAGATGCATCTATGCCAAAGATTCTCTTCTTCACTTGCCACCTCACTTGGATTCTCCATGGCAATTCTTCAGGGACTCTGCAAGCAAGTACCCCAGCAAGGCAATGCTGGGTCGTCGTCAGAAATCTGAATCAGAGGTTGATCCATATAAATGGCTGACATATCAGGAGGCTTATGAAACAGCTATCAGAATTGGTTCAGCCATGAGTAGCCGTGGTGTCAACCCTGGTGATCATTGTGGGATATATGGAATTAACTGTCCAGAATGGATAATTACAATGGAGGCTTGTAATAGCCATTCAGTAACATATGTCCCATTATATGACACACTTGGTCCAAATGCAGTGGAGTTTATCATAAACCATGCTCAAGTTTCAATAGCATTTGTACAGGAAAACAAGATTCCTTCTATTTTGTCTTGTCTTGGTCAGTGTTCTTCAAATCTTAAAACTATTGTGAGTTTTGGTAATGTTTCGACCGCGCAAAAGAAGGAAGCCAAGGAACATGGTACATCCTGCTTCTCTTGGGAAGAGTTTCTCCAGTTGGGGAACTTGGATTGTGATCTACCACCAAAAAAGAAGACTGACATTTGTACAATCATGTACACAAGTGGAACAACAGGCGAACCGAAAGGTGTCATACTTAAGAATGAGGCTTTCATGGCTGAAGTTTTGTCTATTGATCAAATACTTCATTTAACAGACAAAGCAGCAAGCGAAGATGATGTGTACTTCTCTTTTCTTCCTCTTGCTCATGTCTATGACCAGATAATGGAGACCTATTGCATTTATAGGGGAGCCTCAATTGGATTCTGGCAAGGCGATGTGAGGTACTTAATGGAGGATGTTCAGGTGTTGAAGCCAACTATATTTTGTGGCGTTCCTAGAGTTTTCGACCGTGTTTATGCCGGTATCAACAGCAAAATTTCATCCGGAGGAGCGTTGCGAAGTGCATTGTTTCAGTATGCATATAATTACAAGTTGGGATACTTAGAGAAGGGTCTTCCACAAGACAAAGCAGCACCATTTTTTGATAGGCTTGTATTTGACAAGATAAAACAAGGCTTAGGTGGAAGAGTTCGGCTTCTGTTATCCGGCGCTGCTCCTCTGCCTCGGCACATTGAGGAGTTTCTAAGGATCACTAGTGGAGCTACTTTGGCACAAGGATATGGTCTTACTGAAAGTTGTGGAGGATGTTTCACAGCATTAGGCAATGTGTTTTCCATGATGGGAACAGTTGGAGTCCCTATGACAACAATTGAGGCCAGGCTTGAATCCGTGCCGGAGATGGGATATGATGCACTTTCCGGTGAACCTCGTGGCGAAATTTGCCTTAGAGGGACTACCTTGTTCTCAGGTTACCATAAGCGTGAAGATCTTACAGAAGAGGTCATGGTTGATGGCTGGTTTCACACAGGTGACATTGGAGAATGGCAGCCTAATGGAGCTATGAAAATCATTGATAGGAAAAAGAATATCTTTAAGTTGTCTCAAGGAGAATATGTTTCTGTAGAAAATATCGAAAACAAGTATCTGCGATGCCCTCTTATAACATCGATTTGGGTCTATGGAAACAGTTTTGAGTCATTCTTGGTGGCTGTGGTGGTGCCAGATAGAAAAGCCCTTGAAGATTGGGCAGTGAAGCATAATTCATCAACAGATGACTTTAAATCTTTATGTGAGAATTTGAAGGCAAGAAAATACATCTTAGATGAGCTCAACAGCACTGGTCAGAAACATCAACTTAGAGGCTTTGAGATGCTAAAGGCAATTCATCTGGAACCAGCTCCCTTTGACATGGAGAGAGATCTAATAACTCCAACATTCAAATTGAAGAGACCACAATTACTCAAGTACTATAAGGATTGTATTGAGGAGCTATACAAAGAAGCCAAGGGAACCAAGAGGATAACCACCAGGGCCCAAATGGGATAA 2010 0.4224 MEEAYIVKVEEGKEATHDKPSAGPVYRCIYAKDSLLHLPPHLDSPWQFFRDSASKYPSKAMLGRRQKSESEVDPYKWLTYQEAYETAIRIGSAMSSRGVNPGDHCGIYGINCPEWIITMEACNSHSVTYVPLYDTLGPNAVEFIINHAQVSIAFVQENKIPSILSCLGQCSSNLKTIVSFGNVSTAQKKEAKEHGTSCFSWEEFLQLGNLDCDLPPKKKTDICTIMYTSGTTGEPKGVILKNEAFMAEVLSIDQILHLTDKAASEDDVYFSFLPLAHVYDQIMETYCIYRGASIGFWQGDVRYLMEDVQVLKPTIFCGVPRVFDRVYAGINSKISSGGALRSALFQYAYNYKLGYLEKGLPQDKAAPFFDRLVFDKIKQGLGGRVRLLLSGAAPLPRHIEEFLRITSGATLAQGYGLTESCGGCFTALGNVFSMMGTVGVPMTTIEARLESVPEMGYDALSGEPRGEICLRGTTLFSGYHKREDLTEEVMVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVSVENIENKYLRCPLITSIWVYGNSFESFLVAVVVPDRKALEDWAVKHNSSTDDFKSLCENLKARKYILDELNSTGQKHQLRGFEMLKAIHLEPAPFDMERDLITPTFKLKRPQLLKYYKDCIEELYKEAKGTKRITTRAQMG 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00679 669 SUPERFAMILY Acetyl-CoA synthetase-like 36 655 - -
Aip03g00679 669 PANTHER LONG-CHAIN FATTY ACYL COA LIGASE 2 657 - -
Aip03g00679 669 Pfam AMP-binding enzyme 49 522 IPR000873 -
Aip03g00679 669 Pfam AMP-binding enzyme C-terminal domain 532 574 IPR025110 -
Aip03g00679 669 CDD LC-FACS_euk 74 654 IPR045311 GO:0004467|GO:0006631
Aip03g00679 669 ProSitePatterns Putative AMP-binding domain signature. 225 236 IPR020845 -
Aip03g00679 669 Gene3D - 40 514 IPR042099 -
Aip03g00679 669 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00679 Aip-Chr3 6626290 6632796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00679 5 657 Acyl Lipid Metabolism Gene Families AT1G64400 55.573 0.0 792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00679 K01897 - gmx:100790068 1152.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00679 03 6626290 6632796 Aip03g00679 03 6626290 6632796 ECH