Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00678 ATGTGGAAGGGATCAATGGCTTTTCAAGATGAAGCAGCAGCAAAATTGCTTAGCTCTGATCTCAATGAGCTGAGTTTGGCTGCTCACAAGCTTGCTGATCATGCCATCAAGCTTGGTGGTTTAGGCTTTGGAGCTTCCTTTTTTGGATTGATTGCTGCCATTGCTGCTATTTACTTGTTGATTTTGGACCGTACAAATTGGAAGACAAACATTCTTACAGCACTACTCATTCCATATATTTTTTTCAGCCTGCCTTCAATTATTTTTGGTGTATTCAGGGGAGAAATTGGAAAATGGATTGCCATTATTGCTGTTGTTCTAAGGCTTTTCCTTCCAAAACACTTCCCTGATTGGTTGGAACTGCCTGCTGCATTGATTCTTCTTGTTGTTGTTGCACCATCTCTAATTGCAACCACTTTCAGAAACAACATTGTTGAAACTCTTTCACCAAAGCCCATGGCATATCCAATTCTGTTGGCATAA 483 0.4037 MWKGSMAFQDEAAAKLLSSDLNELSLAAHKLADHAIKLGGLGFGASFFGLIAAIAAIYLLILDRTNWKTNILTALLIPYIFFSLPSIIFGVFRGEIGKWIAIIAVVLRLFLPKHFPDWLELPAALILLVVVAPSLIATTFRNNIVETLSPKPMAYPILLA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00678 160 Pfam Cold acclimation protein WCOR413 8 146 IPR008892 GO:0016021
Aip03g00678 160 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 9 145 IPR008892 GO:0016021
Aip03g00678 160 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 9 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00678 Aip-Chr3 6624875 6626276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00678 - - csv:101203533 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00678 03 6624875 6626276 Aip03g00678 03 6624875 6626276 ECH