LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip03g00669	ATGATGATGCAACAGCAGCAACCACTTCACCCTCACCACCACCACCACAACCAGCTCGCCGCCCTTCTCTCCGCCGCCCTCCCCTCCGACGACAACACTCCCACTCCCTCCTCCGCCACCACCTCCGTCTCATCGGTCGCGCTCCCAGACCCTTCCCCTCGCCTCGCCGCCATCGCTTCCCTCCACCGCGCCATCCTCTACCCTCACAACTCTCTCCTCGTTACTCACTCCGCTCACTTCCTCTCCCAAGGTCTCTCCCAACTTCTCTCCGACAAGTTGTATGAGGTTCGGCAAGCGGCTGTTGTAGCGTACGGTGCACTATGTGCAGTGATCTGTTCGGTTCCCGTGACATCAAACGGGAGACAGAATCATGTTATACTTGGTGGTTTGGTTGACCGTTTCATAGGTTGGGCGTTGCCCTTGTTGAGCAATGTCAACGCCGTTGATGGGACGAAGGAATTGGCATTGGAAGGTTTGCGTGAGTTTCTTAATGTTGGGGATATTGGTGGAGCTGAGAGATATGCTTTGCCAATTCTCAAAGCTTGTCAGGTGCTGCTTGAGGATGAGAGAACTTCATTGAGCTTGTTGCATAGGCTTGTTGGGGTTATCACTTTGATATCATTAAAGTTCTTGAGGTGCTTTCAGCCTCATTTCCCTGACATTGTTGATTTGCTTCTCGGTTGGGCGTTGGTGCCGGACCTCGCTGATTCGGATAGGAAGGTTATTATGGATAGCTTCTTGCAGTTTCAGAAACATTGGGTGGGTAGTTTGGCGATGTCATTGAGGTTGTTGACGAAGTTCTTGGGGGACATGGAGGCGTTGCTCCAGGACTCCAGTCCTGGAACCCCGCCGCAGTTTAGGAGGCTGCTGGCCTTGCTGTCTTGCTTCTCGACGATCCTGCAGGCTACGGCTTCCGGGTTACTGGAAATGAATCTTCTTGAACAGATTAGTGAGCCTCTTGTAGGGATGCTGCCGCGCCTGTTGAGATGCTTGTCTCTAATTGGGCAGAAGTTTGGATGGGCAGAATGGATTGAAGATTCTTGGAAGTGTTTGACACTTTTGGCGGAAATATTGCGGGAACGGTATTCGAGTTTTTATCCTCTTGCTGTTGATATATTGTTTCAAAGCTTGAAATTTGGGGCAGCTGCACAACGGGAAGGGTTTAGGAATATTACCTCTTTTCAGGTTCATGGGGTTTTGAAAACAAATCTTCAGTTGCTATCACTGCAGAAGCTTGGCCTCCTCTCATCATCTGTGCGGAAGTTATTGCAGTTTGATGCACCAATTTCTCATGTGAGGTTGCATCCAAATCATTTGGTAACTGGAAGTGCTGCTGCTACTTATATTTTCTTGCTTCAACATGGGAATAAAGAAGTTGTTGATGAAGCAGTCACCTCGTTGATCAATGAGCTGGAACTGTTAAAGGGTGTGATAGAGGAAAACACTGATTATTCTGATCAATTCAATTATGTTATATCGTCTAAAACACTATCAAAAGTTGAACTATTTGCAATAATCAAGTTTGATTTGAAAGTTCTGTTAGCATGTGTGTCTTTAGGTGGGGATAACAGTTTGGTTGGCCAAACAGAAACCACTACGTTGTATATTAGGAGAACATTGGAGAGGCTAACATCAGTTGAGTTCATAATTAATTGCTCCATAAGAGAACATAATTATGACAAAGTTGCAATCGAGAAGGGTGACGATAAAGCTTGTGATGGGCTTTCGGCTGTGACTTCCGAGCATTTAGGAAAGTACAGCATACTTCTTATAAAAGCTCTTCATGTTTCAACTCCTCTAGCAGTAAAATTAGTGGCTCTTGATTGGGTACAAAGGTTCTGTGAGAATGTTATCGCTGTAAACAAGATCTCAAGCTCAAAAGTACTCTCCTATGGAATATGTGGACATACCGGTGTAATTATGAATGTAGTTTTCTCACTTTTAGTTACTACGATTGAGAGGGAACCAGAAGTAAGATCACATGTTGCTGTAACTTTGGAGATGTTAATGCAAGCAAAGCTTTTAAACCCTGTATGTTCATATCCCTTAGCTGAAGCAATATTGGAGAAACTTGGTGATCCAGATATAGATATACGGGAAGCATATGTGAGGCTGCTTGCATGTATTTTGCCTACAACTGTTTATTCATGTGGTCTCTATGATTTTGGGAGATTTAAGCCTGTTGACCTTGTGTTAGGAAACAGTTCTAAGATGCACTGGAAACAATTATTTGCACTTAAGCAGCTGCCGCTGCATTTACACTCACAACAGCTTGTGACAATCTTAAGTTACATTTCACAAAGATGGAAGTCCCCTCTGTCTTCTTGGATTCAGCGGCTAATTCATAGTTGCCGGAGTTCTAAGGATGCTATTTCCAGTCAGCCTGAAGAAACAGGAAATGTTGGTTCAAATTCTCCATGGTTGGATATACAAGTGGATGAAGACATACTTGAAAGAATCTGTGCTGTCAATAATTTAGCTGGTGCCTGGTGGGCTGTTCAAGAAGCAGCTCGGTACTGTATTGCAACACGGCTTCGGACTAATCTTGGTGGGCCTACCCAAACATTTGCTGCTCTTGAACGCATGCTCTTGGACATTGCACACCTTTTACAGCTCGACAATGAACAAAATGATGGGAACTTAAGTATGATCGGGTCTTCTGGTGCTCATTTGTTACCAATGAGACTGCTGTTGGATTTTGTTGAGGCTCTAAAGAAATATGTATACAATGCATATGAGGGTTCTGTCATTTTACCACCTGCAACTCGTCAGAGTTCTTTATTCTTTCGAGCAAACAAAAAAGTATGTGAGGATTGGTTTTCTCGTATATGTGAACCAATGATGAATGCTGGATTGGCTTTGCATTGCAATGATGCTGTTATTCAATACTGCACGCATCGCTTGCAGGAGTTCAAGAATCTCACCATGTCATATGTGAAGGAAAAATCGAGGCCTTCAGTGACTGATACCCACAATATTAGAGGCAGGTACAGAGCAGATATCTTAAAAGTTTTAAGACATCTTTCATTTGCCCTTTGCAAGAATTCTGAACCAGATTCTTTGACCGGCTTACGAAAATGGGTGTCAATTACTTTCTCCTCCATACTTGGTGAGGAAAATCAATCCTTCAACGAGTATGGAACTGTTGGACCCCTCTCATGGATAAGTGGGCTTGTATATCAGGCAAGAGGAGAGTATGAAAATGCTGCTGCTCACTTCACTCACATGCTACAAACTGAAGAGTCACTCAGTACCCTTGGTTCGGATGGTATACAGTTTGTTATTTCACGTGTGATTGAGAGTTATGTAGCTGTATGTGACTGGAAATCTCTTGAGACCTGGCTACTAGAGCTGCAAATGCTTCGTGCTAAGCATGCTGGTAAAGGTTATTCTGGTGCTCTGACAATGGCAGGCAATGAAGTTAATGCAATCCATGCATTAGCACGTTTTGACGAGGGTGATTATCAGGGTGCTTGGTCATGCCTTGATTTGACGCCTAAAAGTAACAGTGAGCTGACCCTTGACCCAAAAATAGCCTTGCAGCGGAGTGAACAAATGCTTTTACAATCACTGCTTTNATGA	3582	0.4411	MMMQQQQPLHPHHHHHNQLAALLSAALPSDDNTPTPSSATTSVSSVALPDPSPRLAAIASLHRAILYPHNSLLVTHSAHFLSQGLSQLLSDKLYEVRQAAVVAYGALCAVICSVPVTSNGRQNHVILGGLVDRFIGWALPLLSNVNAVDGTKELALEGLREFLNVGDIGGAERYALPILKACQVLLEDERTSLSLLHRLVGVITLISLKFLRCFQPHFPDIVDLLLGWALVPDLADSDRKVIMDSFLQFQKHWVGSLAMSLRLLTKFLGDMEALLQDSSPGTPPQFRRLLALLSCFSTILQATASGLLEMNLLEQISEPLVGMLPRLLRCLSLIGQKFGWAEWIEDSWKCLTLLAEILRERYSSFYPLAVDILFQSLKFGAAAQREGFRNITSFQVHGVLKTNLQLLSLQKLGLLSSSVRKLLQFDAPISHVRLHPNHLVTGSAAATYIFLLQHGNKEVVDEAVTSLINELELLKGVIEENTDYSDQFNYVISSKTLSKVELFAIIKFDLKVLLACVSLGGDNSLVGQTETTTLYIRRTLERLTSVEFIINCSIREHNYDKVAIEKGDDKACDGLSAVTSEHLGKYSILLIKALHVSTPLAVKLVALDWVQRFCENVIAVNKISSSKVLSYGICGHTGVIMNVVFSLLVTTIEREPEVRSHVAVTLEMLMQAKLLNPVCSYPLAEAILEKLGDPDIDIREAYVRLLACILPTTVYSCGLYDFGRFKPVDLVLGNSSKMHWKQLFALKQLPLHLHSQQLVTILSYISQRWKSPLSSWIQRLIHSCRSSKDAISSQPEETGNVGSNSPWLDIQVDEDILERICAVNNLAGAWWAVQEAARYCIATRLRTNLGGPTQTFAALERMLLDIAHLLQLDNEQNDGNLSMIGSSGAHLLPMRLLLDFVEALKKYVYNAYEGSVILPPATRQSSLFFRANKKVCEDWFSRICEPMMNAGLALHCNDAVIQYCTHRLQEFKNLTMSYVKEKSRPSVTDTHNIRGRYRADILKVLRHLSFALCKNSEPDSLTGLRKWVSITFSSILGEENQSFNEYGTVGPLSWISGLVYQARGEYENAAAHFTHMLQTEESLSTLGSDGIQFVISRVIESYVAVCDWKSLETWLLELQMLRAKHAGKGYSGALTMAGNEVNAIHALARFDEGDYQGAWSCLDLTPKSNSELTLDPKIALQRSEQMLLQSLLX	1193

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip03g00669	1193	MobiDBLite	consensus disorder prediction	20	46	-	-
	Aip03g00669	1193	MobiDBLite	consensus disorder prediction	28	46	-	-
	Aip03g00669	1193	Pfam	Serine/threonine-protein kinase smg-1	640	1154	IPR031559	GO:0000184\|GO:0004674\|GO:0016310
	Aip03g00669	1193	PANTHER	OS03G0738200 PROTEIN	56	1146	-	-
	Aip03g00669	1193	SUPERFAMILY	ARM repeat	27	783	IPR016024	-
	Aip03g00669	1193	PANTHER	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	56	1146	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip03g00669	K08873		-	gmx:100808763	1795.02

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aip03g00669	03	6555257	6559029	Aip03g00669	03	6555257	6559029	ECH