Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00643 ATGGCGGCGGCGGTGGACGACAGGTTCGCCGATTTGCAGAACCCTAAGACGTGCGTCGTTTTGGGCGGCAGAGGCTTCCTCGGTAGATCGCTGGTACTTAAGCTTCTCAATTTCGGTAACTGGATCGTCCGAGTCGCCGATTCCGCCGAGTCAATTCAGCTCCACGCTTCCGAGGCTCTTCTCTCTGATGCTCTCTCTTCTGCTCGCGCCTCTTACTTTCACCTCGAACTTAGGGATAAACTCAACGTAGCCAAAGTTCTCGAAGGTGCTTCGGTTGTCTTTTATATGGATGTTGCTGGCTTGAATCCGAATGACTTCTATAGTTGCTATACTCTTATAGTGCAAGGTGCCAAGAATGTCATTAGTGCTTGCAGAGAATGTAAAGTGAAACGCCTGATTTATAACAGCTCCGCGGATGTAGTATTTGATGGTTTCCATGATATACATAATGGAGATGAATCATTGCCATATCCATGGAAAATTGAAAACGTGTTAAGTGACTTTAAGGCTCAAGCAGAGGCATTGATCCTCAGTGCCAATGACATTGATGGCTTGTTGACATGTGCTCTTCGTCCTTGTAATGTTTTTGGACCTGGTGACACGGAGTTTGTGCCATTTTTTCTTGACTTGGCAAGATTTGGATTTGCAAAGTATATTATAGGGACTGGCGATAATATGTCAGACTTTACCTTTTATGAGAATGTTGCTCATGCCCATATATGTGCAGAAGAAGCCTTAAACTTTCAAACAGTCTCTGTGGCTGGAAAGGCATTTTTTATTACTAATTTTGAGCCTATGAAGTTCTGGGAATTTCTCTCACTTTTGTTGGAAGGTCTTGGATATCAAAGGCCACTCACCAAACTTCCTGTCAATTTGGTGCAATTCGTTCTCTCAGTTTTAAAGTGGATGCATGACAAGTTGGGGTCCGGAGGCTTCAGTTATCCTTTGTTAGTTCATTTTTTTCAGTTAGCAACACACACCAGAACTTTCAGCTGCACCGCAGCTCGGAGAGAACTTGCATACTTACCAATAATCTCCCTTGAGGAAGGGATCGCATTAACCATAGATTCGTTCTCTCATCTAGCCAGAGAGCTATCTATTTCAGGATGCTGTGATTCCACTGAACAGTCAAAAGCAGCTAAACTGCTTGGAGGTGGAAAAGTGGCTGATGTTTTGTTGTGGAGAAATGAAAAGACATCCTTTGCATGTTTCATTGTGATGGTTTTGTTATTTTACTGGTTTTTCCTCTCTGGAAGCCCTTTTATATCATCTGCTGCCAAATTCTTGATGCTTGTCACATTTCTTCTCTTTGGATGGGGTACTCTACCAGCAAACCTATTTGGGTTTCAAACAAAAAGGATATCCTCCTCTAGTTTTAAGATATCTAATTCAGAAATGAAAGGTTCAGTTACAACTACAGTGAATCAGTGGAACAACAATTATAAAACTATAAGGAGACTGCGTCAAGGGGAAGACTGGTTGACGTTCTTCAAGATTGCAATTCCACTTTACTTTCTGAAGTTGATCTTGTCAGCGCATAAGTTGACGACATTTGTAGGGATAGGTTTGGTATTTGCATTCACTGCATTTTTTATTTACGAGCAATACCAATCAGAAATTGATTTATTAGCGGAAATTCTTTTCGCTCAATTGAATGCACTCATGAGATACTTGATGCGTGTTTTATCTGATTTGACTTCGCGTCTTCTGCAAAAATTTGGCAAGGCTCGGTCTTACAAGGAACCAGAAGTAAAGGAACTAAGATAG 1767 0.4171 MAAAVDDRFADLQNPKTCVVLGGRGFLGRSLVLKLLNFGNWIVRVADSAESIQLHASEALLSDALSSARASYFHLELRDKLNVAKVLEGASVVFYMDVAGLNPNDFYSCYTLIVQGAKNVISACRECKVKRLIYNSSADVVFDGFHDIHNGDESLPYPWKIENVLSDFKAQAEALILSANDIDGLLTCALRPCNVFGPGDTEFVPFFLDLARFGFAKYIIGTGDNMSDFTFYENVAHAHICAEEALNFQTVSVAGKAFFITNFEPMKFWEFLSLLLEGLGYQRPLTKLPVNLVQFVLSVLKWMHDKLGSGGFSYPLLVHFFQLATHTRTFSCTAARRELAYLPIISLEEGIALTIDSFSHLARELSISGCCDSTEQSKAAKLLGGGKVADVLLWRNEKTSFACFIVMVLLFYWFFLSGSPFISSAAKFLMLVTFLLFGWGTLPANLFGFQTKRISSSSFKISNSEMKGSVTTTVNQWNNNYKTIRRLRQGEDWLTFFKIAIPLYFLKLILSAHKLTTFVGIGLVFAFTAFFIYEQYQSEIDLLAEILFAQLNALMRYLMRVLSDLTSRLLQKFGKARSYKEPEVKELR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00643 588 Gene3D - 8 362 - -
Aip03g00643 588 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 3 14 494 - -
Aip03g00643 588 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 19 289 IPR002225 GO:0003854|GO:0006694|GO:0016616
Aip03g00643 588 ProSiteProfiles Reticulon domain profile. 388 577 IPR003388 -
Aip03g00643 588 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 360 IPR036291 -
Aip03g00643 588 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 14 494 - -
Aip03g00643 588 Pfam Reticulon 388 545 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00643 Aip-Chr3 6267991 6274542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00643 17 364 Lipid Metabolism Gene Families AT2G33630 30.133 1.69e-33 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00643 K23558 - gmx:100814147 811.216