Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00640 ATGGGGTTGGAATCGCTTGGTGATTTGGCGATTCATGTCATTCTCAAGAAGTTGCCTCCCAAAGACGCTGGAAGGGTTTCCTGCGTCAGCAAAAGGCTTCGTTCTTCTGCCTCCGATGACCTAATTTGGATCAATTTCTGTCGCAACGATCTCTCCCTCTGTCACCCTCGTGATCCTCTCGGAAACCCTCTCCCTTCCTTCAAGGAAGCTTATCAATCATGGCGTCAAGCTTTTGGGAAGTATCCTTGGTCACTTGTTAAGCGTGTAAAGAGGTGCTGGGACAGAATAGAGGCTTGGCTGAACGATAATTTTCCCGAAGCTAAGGCGACTCTTTGTAAAGGTGCAACAGAAGAAGAGATTCTAGAGTTGGAGAGTGCCTTAAAAGTGAAGCTGCCACTTCCTACTAGGATTCTGTATCGCTTTCATAATGGTCAAGAAGTTGAAAAGGCAAATCTAGTAACTCATACATTTGGCAGTTCTTTGGGCATAATTGGTGGTTACTCATTCTATAGTCATTATGTGAACGTGTACCTGTTACCAATACGTCAGGTAATACGAGATACTCTGCAAGTTACGCGTAAATTAGGCTTCTTCAGGAGATCCAAGTATGTTCTTGTGGCTGCTTCGACCACTTACAGTGAAAAGTTGTTTTTCCTCAATTGCACCAATGGTCAACTATATGTTGGAACCAGAAATCTTCTTACAGAAGGGGAAATGATCCCTTGTGTACCCCATGAGCTGATTAAGTTAGGTCATGGGTTGAATAGTAAAGAGCAACAGGATGCCATGCTACTTTGGTTAGAAGAACACGGTCGCCGTTTACAGAATGGATTTGTCAAACTGCATGAAGAAGAAAATGTCAGAGCCATTAATCTTTTCCCTGAAGAACCTCCTCTTTGTTCTACAGCTATAACCAATGGTGTGAAGGTCCGCGCCTCTGCTCTGCTTATCCCTGAGTTGTCGGATCTTCAAGACGATGTTGAAAAATTCTTATTTGCCTATTCAATCCGTATGTCCCTTGAACCTCAAGGATGCATCATTAATGGGGTATCCTTCAACTCTTGCCAGCTTCATTGGAGGCACTGGATAATTCGTGCTGATGATATGGTAGTATCTGATGTTAATGGTGAAGCTGTTATCGGGAAGTTCCCACTTTTGTGTCCAGGTGATAAAGAATTTGTTTATCAGAGTTGCACACCTATACCAACATCATCAGGTTCTGTTGAAGGTTCTTTTACATTTGTACCTGGCAGATTGGCAGAACCAAAAGGAGACCCTTTTCTAGTTACAGTGGCAAGCTTCCCACTTAAGCTGCCAGATTATGTATTCTGA 1332 0.4324 MGLESLGDLAIHVILKKLPPKDAGRVSCVSKRLRSSASDDLIWINFCRNDLSLCHPRDPLGNPLPSFKEAYQSWRQAFGKYPWSLVKRVKRCWDRIEAWLNDNFPEAKATLCKGATEEEILELESALKVKLPLPTRILYRFHNGQEVEKANLVTHTFGSSLGIIGGYSFYSHYVNVYLLPIRQVIRDTLQVTRKLGFFRRSKYVLVAASTTYSEKLFFLNCTNGQLYVGTRNLLTEGEMIPCVPHELIKLGHGLNSKEQQDAMLLWLEEHGRRLQNGFVKLHEEENVRAINLFPEEPPLCSTAITNGVKVRASALLIPELSDLQDDVEKFLFAYSIRMSLEPQGCIINGVSFNSCQLHWRHWIIRADDMVVSDVNGEAVIGKFPLLCPGDKEFVYQSCTPIPTSSGSVEGSFTFVPGRLAEPKGDPFLVTVASFPLKLPDYVF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00640 443 Pfam ApaG domain 324 415 IPR007474 -
Aip03g00640 443 ProSiteProfiles ApaG domain profile. 302 443 IPR007474 -
Aip03g00640 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Aip03g00640 443 Pfam F-box domain 6 44 IPR001810 GO:0005515
Aip03g00640 443 SMART fbox_2 6 46 IPR001810 GO:0005515
Aip03g00640 443 Gene3D - 3 95 - -
Aip03g00640 443 Gene3D ApaG domain 300 443 IPR036767 -
Aip03g00640 443 SUPERFAMILY SMI1/KNR4-like 92 182 IPR037883 -
Aip03g00640 443 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Aip03g00640 443 SUPERFAMILY F-box domain 4 78 IPR036047 GO:0005515
Aip03g00640 443 SUPERFAMILY ApaG-like 304 443 IPR036767 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00640 K10290 - gmx:100778108 702.205