Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00637 ATGGGGAAGCCTTTGTTCTATGAGATCTTGGAGAAGCCAGCAACTAGTTGCATCATAGGAATATGCAGTGCTATTTGGTTCTACATACAGAAGAAGAATATTGGATACTCACATGTTGGTCTGAGTTATGAGACTGCCATTGAAGGGCATTATTGGAGGATCATCACCTCTGCATTCTCCCATATAAGTGTCATTCATCTTGTTTTTAACATGAGTGCACTTTGGAGTCTTGGGGTGATAGAGGAATTAGGGCACTTGGGTCTTGGTGTTGGGTACTATTTGCAATACACACTTGTATTGGTTGTTTTATCAGGGTTGCTGGTTCTTGGAATGTACCACATATTGATTCAGAGATTTAAACTCGAGTATTTTCGCCGAATTACAGCTGTTGGTTATTCGTGTGTTGTATTTGGGTGGATGACAATTCTTGCTGTTAAGCAGCCTTCCTCAAAGTTGGATCTCTTTGGATTCCTTTCGCTTCCAATCAGTTTCGCACCGTTTGAGTCGCTTGTTTTTACTTCGATTATTGTCCCTCAGGCAAGTTTCCTTGGCCATTTGTCAGGAATTGTGATTGGATATGCTATAGCATGGGGTTTGATTCATGGTATGAACAATTACTGGGCACTCTCCTTGTTGGGTTGGATCATACTTGTCTTCATCTTGAGCTTGAAGAGATCTGGTGCTGTTGACCTCAACTTCCTTGAGATCGAATCAGTGACTGATCCATCCTTCCCGTCGGTACGGTTTTTGGGATCAGGCAATGGCAGAACATTGCAGATCAGTGCATTGCCTAATGGAAATGTTGAATTTGTCTAA 816 0.4203 MGKPLFYEILEKPATSCIIGICSAIWFYIQKKNIGYSHVGLSYETAIEGHYWRIITSAFSHISVIHLVFNMSALWSLGVIEELGHLGLGVGYYLQYTLVLVVLSGLLVLGMYHILIQRFKLEYFRRITAVGYSCVVFGWMTILAVKQPSSKLDLFGFLSLPISFAPFESLVFTSIIVPQASFLGHLSGIVIGYAIAWGLIHGMNNYWALSLLGWIILVFILSLKRSGAVDLNFLEIESVTDPSFPSVRFLGSGNGRTLQISALPNGNVEFV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00637 271 PANTHER RHOMBOID-LIKE PROTEIN 13 1 271 - -
Aip03g00637 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016021
Aip03g00637 271 PANTHER RHOMBOID PROTEASE 1 271 - -
Aip03g00637 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
Aip03g00637 271 Gene3D - 10 198 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00637 Aip-Chr3 6230870 6232480 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00637 - - gmx:100818954 468.388