Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00631 ATGGCTACTTCGTTGTTCCGGAGCATTCGGAGAGCTTCCTCTCTTCTCAAATTCTCGTACTCAACTACCTCCTTTTCGGTTTCTCCCAGGTCAGTTGTGAGGTCCCGGATATCGGTTTTCTTACCGTTTAGGCAATGCAATTCAGTTGGGAAGCCGAGTTCATGGTGGGGTTTCAGAGAGTTGAGCTATGGCACTGTGAACTTGGTTATATCGGAAGGGAAGACCAAGTTTGAGGCTCGCGAGGTTGAGCCGCCAAGGAAGGACAAATATAAAACTAAGAAGAAGCTGAAGATGCAGAGGAAGAGGGAGAAGGAGAAGAGGAAAGCTGCAAATAGGAGAGACCCTCGTTGGCTTGGTGTCAAGGGGAAGAAGAAGCAGAAGTTTGCCAATGCAGAAGAGAGAATCAAGTGCAAGCTTGAGAAAGCAAGAATTAAGGAATCAATGCTCATTGAAAGACTCAAAAGATATGATGTTCCTAAAGCTCAGGGTCCTGTTGCCAAACCTGATGGTTTGACGGGGGAGGAACGATTTTATTTGAAGAAGATGGCTCAGAAGAGTTCTAATTATCTACAAGTTGGCCGAAGAGGATTATTTGGAGGGGTTATTCTTAATATGCATATGCATTGGAAGAAACATGAGACTGTTAAGGTCATATGCAAGCCTTGTAAACCTGGCCAAGTACATGAGTATGCACAAGAACTTGCTAGATTGAGTGGTGGTATTCCAATCCACTTCATTGGAGATGACACTATAATATTTTATCGCGGAAAGAACTATGAACAGCCCGAGGTTATGTCACCAGTAGATACATTATCCAAGAAAAAGGCACTTGAAAAATCCAAGTATGAGCAATCTCTTGAATCAGTTAGGCGCTTCATCGCTATCGCTGAGAAAGAACTAGAGCTATATTACAGGCATATCGCACTCTACGGCAATCCGAACGACCGTAATCCCTTATCAGTTCTTGAGGGCCCAAGTGGAGACTCCATCAGAAAAGGGTACCATAGGATTCATAAACAAAGTAACCCTGAGTTGATTAATGATCTTGCTGATTCCAAAGAAATGGGGCTATCAGAATCTGAAGATAATAACAATGAAGATGAAAACTTGTCAATGGATGAATCAGATTCTGAAGAGGACAGCATGCTAGATACTAGTGATGATGATAAAGAAAGTGAGGAATGTTTTACTAATTTGAAAGATGCAAGTGCAAGCTCAAGAGCTGGTACATCACCATCAATGTCTAAACATACCTACCATTATAGTAATTGTAATAATCAATGTTTATTATCCAAACAAATGCTATGCACTAGAGATTAG 1320 0.4159 MATSLFRSIRRASSLLKFSYSTTSFSVSPRSVVRSRISVFLPFRQCNSVGKPSSWWGFRELSYGTVNLVISEGKTKFEAREVEPPRKDKYKTKKKLKMQRKREKEKRKAANRRDPRWLGVKGKKKQKFANAEERIKCKLEKARIKESMLIERLKRYDVPKAQGPVAKPDGLTGEERFYLKKMAQKSSNYLQVGRRGLFGGVILNMHMHWKKHETVKVICKPCKPGQVHEYAQELARLSGGIPIHFIGDDTIIFYRGKNYEQPEVMSPVDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYYRHIALYGNPNDRNPLSVLEGPSGDSIRKGYHRIHKQSNPELINDLADSKEMGLSESEDNNNEDENLSMDESDSEEDSMLDTSDDDKESEECFTNLKDASASSRAGTSPSMSKHTYHYSNCNNQCLLSKQMLCTRD 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00631 439 Coils Coil 93 113 - -
Aip03g00631 439 MobiDBLite consensus disorder prediction 90 107 - -
Aip03g00631 439 Pfam CRS1 / YhbY (CRM) domain 171 255 IPR001890 GO:0003723
Aip03g00631 439 Gene3D - 171 269 IPR035920 -
Aip03g00631 439 MobiDBLite consensus disorder prediction 361 391 - -
Aip03g00631 439 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 391 - -
Aip03g00631 439 MobiDBLite consensus disorder prediction 354 416 - -
Aip03g00631 439 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 391 IPR040286 -
Aip03g00631 439 SMART CRS1_YhbY_2 171 255 IPR001890 GO:0003723
Aip03g00631 439 MobiDBLite consensus disorder prediction 398 416 - -
Aip03g00631 439 SUPERFAMILY YhbY-like 171 265 IPR035920 -
Aip03g00631 439 ProSiteProfiles CRM domain profile. 169 266 IPR001890 GO:0003723
Aip03g00631 439 MobiDBLite consensus disorder prediction 80 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00631 Aip-Chr3 6170914 6174071 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00631 - - ahf:112769128 649.818