Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00629 ATGAAGGAAGCCTTCAACGTATTCGATCAGAACGGAGATGGTTACATCACGGTGGAGGAGCTTAGATCGGTACTTTCTTCCTTGGGGCTGAAGCAAGGGAGGACGGTGGAGGAGTGCCGGAAGATGATAATGAAGGTGGACCGCGACGGCGACGGCATGGTTGATTACAAAGAATTCAAGCAGATGATGAAAGGAGGAGGATTCAGTGCTCTTGGAGTTACTGATGTCCAAATGAACAGAGAAGAGGGACTAGTTACAGTTTTTGGTGAGGCAGATTCTTCAAAACTCATCAAAGCAGTAAAAAAGGTTGGAAGAAAAAGAGCAGAGATTTATATGGAGCCTAAAGATCAACCTACTGAACCAAGCTGCACCTGCTTAGAACACACAAAGAGCACAAAATCCAAGAACTCAAGCATCCCTGATGACACAAAGAGCACCAAATCCAAGCACACAAAGGCGAGTGCGAAACATGATGATGATGATGATGATTCTGATGATAATTGCTCTGCTGATGCTGATTTTGGCGACCACGATCTGCCTCTGCCTCCACAATTTAATGATCATGGAGCTCCTTCAAGGTCCAACAACCATGTTGCTTCTAATGCAAGCTATCATCATTATCCTCAAAATAATCCAATAATGCTAGGTACCAATAATGGTGGTGGTGGTGGCGGTTATTTTCAAGGGACAACATTTCCTGTGCCTGCATATATTAATACATATGCAAGATTTTGTAATGACTACAATGAATGTGTTCCTCCTCCAATGGGTTATGGTAGACCACAACAACCACCTTATCAATACAGTTACTATCATCATCAACAGCGTTATCCACCACAACCACAGCCGCAGCAACAGGCTCCTCCTCCTCCTCCTCCTCCTCCATGCTCATATTATGGTGATGCTAATGGATGCACCATATCATGA 927 0.4412 MKEAFNVFDQNGDGYITVEELRSVLSSLGLKQGRTVEECRKMIMKVDRDGDGMVDYKEFKQMMKGGGFSALGVTDVQMNREEGLVTVFGEADSSKLIKAVKKVGRKRAEIYMEPKDQPTEPSCTCLEHTKSTKSKNSSIPDDTKSTKSKHTKASAKHDDDDDDSDDNCSADADFGDHDLPLPPQFNDHGAPSRSNNHVASNASYHHYPQNNPIMLGTNNGGGGGGYFQGTTFPVPAYINTYARFCNDYNECVPPPMGYGRPQQPPYQYSYYHHQQRYPPQPQPQQQAPPPPPPPPCSYYGDANGCTIS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00629 308 PANTHER CALMODULIN-LIKE PROTEIN 7 1 72 - -
Aip03g00629 308 Gene3D - 1 65 - -
Aip03g00629 308 ProSiteProfiles EF-hand calcium-binding domain profile. 1 31 IPR002048 GO:0005509
Aip03g00629 308 MobiDBLite consensus disorder prediction 262 308 - -
Aip03g00629 308 ProSiteProfiles EF-hand calcium-binding domain profile. 34 69 IPR002048 GO:0005509
Aip03g00629 308 SMART efh_1 1 28 IPR002048 GO:0005509
Aip03g00629 308 SMART efh_1 38 66 IPR002048 GO:0005509
Aip03g00629 308 MobiDBLite consensus disorder prediction 134 159 - -
Aip03g00629 308 MobiDBLite consensus disorder prediction 188 205 - -
Aip03g00629 308 ProSitePatterns EF-hand calcium-binding domain. 47 59 IPR018247 -
Aip03g00629 308 MobiDBLite consensus disorder prediction 112 205 - -
Aip03g00629 308 Pfam EF-hand domain pair 1 64 IPR002048 GO:0005509
Aip03g00629 308 MobiDBLite consensus disorder prediction 281 298 - -
Aip03g00629 308 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 1 72 - -
Aip03g00629 308 SUPERFAMILY EF-hand 1 66 IPR011992 -
Aip03g00629 308 CDD EFh 2 64 IPR002048 GO:0005509
Aip03g00629 308 ProSitePatterns EF-hand calcium-binding domain. 9 21 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00629 Aip-Chr3 6164584 6167875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00629 4 72 EF-hand Containing Proteins AT3G07490 82.609 3.13e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00629 K13448 - ahf:112788879 310.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g00321 08 2401613 2403020 Aip03g00629 03 6164584 6167875 PCT