Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00611 ATGATTACACCACAAATTCAAGTAACAAATTCTTCAAGCCCAACCTATCTCATATTTAACAAGCCAATAACAACAACAAGCCTCCATGGTAGTGGTGGTAGTAGTAGTATCTACCCTTCTTTTAGGGTTAGGACTAGTAGGCCAATATCATTCCGAAACCGTAGAAGGTGTAATAGTAGCAAAACAATCAAAGCTGTGGCTATGACTGAAGAAGAGAATAAGAAATCAATAATGAAGGTTAAAGCCACCATAAGAGTTCAACCAACCGTTGGAGGGATATTTTCGGAAATGGCCATAGAACGAGGGCTTGATGATATAACTGATTTGTTTGGTAAATCATTACTCTTGGAGCTTGTTAGCTCAACCCTTCATCAAACGACGGGGCTGGAGAAGGAAACGATAAGCGGTTACGCCCACAGGACGGTTCAAACAGCAGAGGAGGTCAAGTATGAGGCTGAGATTGTGGTGCCACATGGTTTCGGAGAGATTGGTGGCATTTTCGTGGAGAATGAGCACCGTAGAGAGATGTTCATTAAGGATATTGTCCTTGATGGCTTTGAAACTGGTCCCCTTCGCTTCTCTTGCGACTCTTGGGTTCATTCCAAGTTTGACAACCCCGTTAAGAGGCTCTTTTTCACCAACAAGTCATATTTGCCATCAGAGACACCAGAAGGATTGAAGAGGCTAAGGGGAGAGGAGCTAGAGCTTCTCAGAGGGAATGGGCATGGCGAACGCAAGAGCTTCGACCGCATATACGATTACGATGTCTACAACGACCTTGGAGATCCAGACAACGATATCGAACTCAAGAGACCTGTTCTTGGTGGCAAACACAATCCATATCCACGTCGTTGCAGAACTGGAAGACCTCGCTCCAAAGCAGACCCGTTATCGGAGGAAAGGAGTAGCAGCATCTATGTGCCAAGGGACGAAAGCTTCTCAGAAGTGAAGCAGTTAACGTTCTCGGCGAAGACGGTGTACTCGGTGCTGCACGCGGTGGTGCCGGCGGTACAGACGGCGATAGTTGACAGGGATCTAGGGTTTGAATTGTTCTCACACATAGATGATCTTTTCCATCAAGGGATTGGCTTGCCTCCTTCTTCAAAGAACAAAGGGGTTCTGAGTAACATGTTACCCAGGCTTATCAAGTTCATCAACGAAACCCAAGACGACCTTCTCCGTTTTGAGCCTCCCGCACCCATGGACAGGGACAGGTTCTTTTGGTTTAGGGACGAAGAATTTGGAAGACAAACTCTTGCGGGTCTCAACCCATGTTGTATACAACTGGTGACGGAATGGCCATTGAAGAGCAAACTGGACCCAAATGTTTATGGGCCTGCGGAATCAGCAATTACGAAAGAACTAGTTGAAAAGGAAATCAGAGGATTCTGTACGGTGGAAGAGGCTATAGAAGCCAAGAAATTGTTCGTATTGGACTACCACGATTTACTATTGCCAGTGGTAGAGCAAGTAAGGGAGCTTCAAGGGACAACACTATATGGATCTAGGGCACTCTTCTTCCTTACACCCGAATCCACACTCCGCCCACTCGCTATCGAGCTTGTTCGCCCTCCCATCAATGGAAACCCTCAGTGGAAGCAAGTCTATACCCCCACGTGGCACTCTACCGGTGATTGGCTTTGGAGGCTTGCCAAGGCTCATCTTCTTGCTCATGACTCTGGTTACCACCAACTTGTTAGTCACTGGTTGCGAACTCATTGTTGCACAGAACCTTACATAATAGCAACGAACAGGCAATTAAGTGCAATGCACCCAATCTATAGGCTTTTAAATCCACACTTCAGATACACAATGGAGATCAATGCACTTGCACGTGAAGCCCTAATCAATGCAGATGGGATCATAGAAACAAGCTTCACTCCCAAGAAATACTCTATCCTCCTAAGTTCCATTGCTTACGACAAACACTGGCGATTCGACTTGCAATCCCTCCCCAATGACCTCATCCACAGGGGGATGGCGGTTAAAGACGATAATGCCCCTCATGGTTTGAGGCTCACCATAGACGACTACCCTTATGCCAATGATGGACTCATCCTTTGGGATGCTCTCAACGGATGGATCACTGATTATGTTGACCGCTATTACTCCGATTCCGATCTTGTCCGCTCCGATGAGGAACTCCAGGCATGGTGGCATGAGATCAAGAATGTTGGACATGGCGACAAGAAAGACGAGCCATGGTGGCCGCTTTTGAACACCAAAGAGGATCTTGTTCAGATTCTCACCACCATTGTTTGGATAGCTTCTGGCCACCACGCTGCCGTCAACTTTGGCCAATATGATTATGCGGGGTATTTCCCAAACAGACCCACAATTGCAAGGAAGAAGATGCCAACAGAGGAACCAACAGAAAAGGAATGGGAAGAATTCATGGAGAAGCCAGAGATGGAATTGTTAAAGTGCTTCCCATCACAGATCCAAGCGACAACAGTGATGGCAGTGTTAGACATATTGTCAAGCCACTCGCCAGAGGAAGAGTATTTGGGTGAAACCATAGAGCCGTCATGGGAAGAAGACCCAATTGTAAAAGGAGCGTTTGAGAAGTTCANNNNNAAGAACAGAAATGGTGCTGGAATGTTGCCGTATCAGCTTCTCAAACCAGTTTCGGAGCCTGGTGTTACTGGTAAAGGAGTTCCATACAGTATCTCTATTTGA 2679 0.4644 MITPQIQVTNSSSPTYLIFNKPITTTSLHGSGGSSSIYPSFRVRTSRPISFRNRRRCNSSKTIKAVAMTEEENKKSIMKVKATIRVQPTVGGIFSEMAIERGLDDITDLFGKSLLLELVSSTLHQTTGLEKETISGYAHRTVQTAEEVKYEAEIVVPHGFGEIGGIFVENEHRREMFIKDIVLDGFETGPLRFSCDSWVHSKFDNPVKRLFFTNKSYLPSETPEGLKRLRGEELELLRGNGHGERKSFDRIYDYDVYNDLGDPDNDIELKRPVLGGKHNPYPRRCRTGRPRSKADPLSEERSSSIYVPRDESFSEVKQLTFSAKTVYSVLHAVVPAVQTAIVDRDLGFELFSHIDDLFHQGIGLPPSSKNKGVLSNMLPRLIKFINETQDDLLRFEPPAPMDRDRFFWFRDEEFGRQTLAGLNPCCIQLVTEWPLKSKLDPNVYGPAESAITKELVEKEIRGFCTVEEAIEAKKLFVLDYHDLLLPVVEQVRELQGTTLYGSRALFFLTPESTLRPLAIELVRPPINGNPQWKQVYTPTWHSTGDWLWRLAKAHLLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSAMHPIYRLLNPHFRYTMEINALAREALINADGIIETSFTPKKYSILLSSIAYDKHWRFDLQSLPNDLIHRGMAVKDDNAPHGLRLTIDDYPYANDGLILWDALNGWITDYVDRYYSDSDLVRSDEELQAWWHEIKNVGHGDKKDEPWWPLLNTKEDLVQILTTIVWIASGHHAAVNFGQYDYAGYFPNRPTIARKKMPTEEPTEKEWEEFMEKPEMELLKCFPSQIQATTVMAVLDILSSHSPEEEYLGETIEPSWEEDPIVKGAFEKFXXKNRNGAGMLPYQLLKPVSEPGVTGKGVPYSISI 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00611 892 PRINTS Plant lipoxygenase signature 432 451 IPR001246 GO:0016491
Aip03g00611 892 PRINTS Plant lipoxygenase signature 345 366 IPR001246 GO:0016491
Aip03g00611 892 PRINTS Plant lipoxygenase signature 823 837 IPR001246 GO:0016491
Aip03g00611 892 PRINTS Plant lipoxygenase signature 209 230 IPR001246 GO:0016491
Aip03g00611 892 PRINTS Plant lipoxygenase signature 280 299 IPR001246 GO:0016491
Aip03g00611 892 PRINTS Plant lipoxygenase signature 183 201 IPR001246 GO:0016491
Aip03g00611 892 PRINTS Plant lipoxygenase signature 393 409 IPR001246 GO:0016491
Aip03g00611 892 PRINTS Plant lipoxygenase signature 500 524 IPR001246 GO:0016491
Aip03g00611 892 PRINTS Plant lipoxygenase signature 248 264 IPR001246 GO:0016491
Aip03g00611 892 ProSiteProfiles PLAT domain profile. 93 213 IPR001024 GO:0005515
Aip03g00611 892 PANTHER LIPOXYGENASE 36 890 - -
Aip03g00611 892 SMART LH2_4 78 214 IPR001024 GO:0005515
Aip03g00611 892 Gene3D - 336 424 IPR027433 -
Aip03g00611 892 SUPERFAMILY Lipoxigenase 218 892 IPR036226 -
Aip03g00611 892 ProSitePatterns Lipoxygenases iron-binding region signature 2. 590 600 IPR020834 GO:0016702|GO:0046872
Aip03g00611 892 Gene3D PLAT/LH2 domain 73 235 - -
Aip03g00611 892 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 78 217 IPR036392 GO:0005515
Aip03g00611 892 PRINTS Lipoxygenase signature 563 580 IPR013819 GO:0016702|GO:0046872
Aip03g00611 892 PRINTS Lipoxygenase signature 545 562 IPR013819 GO:0016702|GO:0046872
Aip03g00611 892 PRINTS Lipoxygenase signature 583 603 IPR013819 GO:0016702|GO:0046872
Aip03g00611 892 PANTHER LIPOXYGENASE 36 890 IPR000907 GO:0016702|GO:0046872
Aip03g00611 892 MobiDBLite consensus disorder prediction 278 301 - -
Aip03g00611 892 Gene3D - 560 890 - -
Aip03g00611 892 CDD PLAT_LH2 78 214 IPR042057 -
Aip03g00611 892 Pfam Lipoxygenase 225 860 IPR013819 GO:0016702|GO:0046872
Aip03g00611 892 ProSitePatterns Lipoxygenases iron-binding region signature 1. 563 577 IPR020833 GO:0016702|GO:0046872
Aip03g00611 892 Gene3D - 236 334 - -
Aip03g00611 892 Gene3D - 425 559 - -
Aip03g00611 892 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 216 892 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00611 Aip-Chr3 5997018 6005614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00611 156 892 Acyl Lipid Metabolism Gene Families AT3G45140 58.630 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00611 K00454 - gmx:100787202 1271.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00611 03 5997018 6005614 Aip03g00611 03 5997018 6005614 ECH