Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00608 ATGTCGTCAACCACCACCCCTCACGGTGGAGACTTCGACACGCCGACACTGGACATGGAGTCAGCGGAGCTCCTCCAAACCATATCGGAGCACGGCGGCTACGCCTACGTGAGAATGGCATCGCTGGCGGCGACCGGTGACGTCCGGGCCGCGGAGGCGGCGCTGGAGATGGCGTGGGAGCAGCTGCACTCAGGTCCGTGGCAGTCGGTGCTTCCGGTGTGGCGCGACGCGTACTCGATGGCATGCCTCCACGTGGCAAGGCACCACAACGGTAACGGCGAGTTCAAGGAGGCGCTTAGGGTTCTTGACATGGGGATCATCATGGGAGGGACGCTTCTCAGAAAGGATTTGGACTCTGCGATCGAGAAGGTTTCAGAGAGAGCCAAGAGTTCCCGTAGGGTTTCTGAGGGAAGCTTCCAAGAAGGTTCGGTCAACAACTCCGAGCAACGAAGCCTTGTTCATCCGCAATTTCATGTGTCTCAGGTGCTCCAACTTTTACCTATCAAGTCCCTTTCTTCTAAGATTGTGGAGAAGAGATCTGGTTTGTCGCTGGACAAGTTCTTGAAAGATCATTACCTGGCTGGTTCACCGGTTATCATCAGTGATTGTATGGTTCACTGGCCGGCCAAGACGAAATGGAACAACATAGACTATTTACTGAGAGTTGCTGGTGATCGTACAGTTCCCGTCGAGGTTGGCAAGAACTATTTATGTACAGACTGGAAGCAAGAGCTAATCACATTTTCAGAGTTGCTTCAGCGTATAAAATCCAATGGTGGTTCTCCAGGGGGTCCTACATATCTTGCCCAGCATCCATTATTTGATCAAATAAATGAGCTTCGGAAAGATATCTTTATTCCTGACTATTGTTTTGCCGGGGGAGGGGAGCTAAGATCTCTCAATGCTTGGTTTGGTCCAGCTGGAACAGTAACGCCATTACACCATGATCCACATCATAACATACTAGCTCAGGTTGTTGGAAAGAAGTACGTTAGGCTTTACTCAGCATCTTTGTCTGAGGAACTTTATCCCTACTCGGAGACAATGCGTACCAATTCCAGCCAGGTATTTTGTTTGTTGAACTATATGACTGATTGA 1098 0.5036 MSSTTTPHGGDFDTPTLDMESAELLQTISEHGGYAYVRMASLAATGDVRAAEAALEMAWEQLHSGPWQSVLPVWRDAYSMACLHVARHHNGNGEFKEALRVLDMGIIMGGTLLRKDLDSAIEKVSERAKSSRRVSEGSFQEGSVNNSEQRSLVHPQFHVSQVLQLLPIKSLSSKIVEKRSGLSLDKFLKDHYLAGSPVIISDCMVHWPAKTKWNNIDYLLRVAGDRTVPVEVGKNYLCTDWKQELITFSELLQRIKSNGGSPGGPTYLAQHPLFDQINELRKDIFIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYVRLYSASLSEELYPYSETMRTNSSQVFCLLNYMTD 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00608 365 ProSiteProfiles JmjC domain profile. 275 365 IPR003347 -
Aip03g00608 365 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 32 356 - -
Aip03g00608 365 PANTHER - 32 356 - -
Aip03g00608 365 Pfam Cupin-like domain 186 352 IPR041667 -
Aip03g00608 365 Gene3D Cupin 174 363 - -
Aip03g00608 365 SUPERFAMILY Clavaminate synthase-like 176 359 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00608 170 343 Acyl Lipid Metabolism Gene Families AT3G45880 27.000 6.90e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00608 K24444 - gmx:100813075 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00608 03 5952704 5956512 Aip03g00608 03 5952704 5956512 ECH