Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00607 ATGGCTTCAACTGCTTTCAACGACAAGAATGGAAACCCTGAATTGTCAAGGCAGGAAATTCAGAACGCCATAGCCAAAGCTGTGGAGCTAAGAGCACTTCATGCAACTTTGATGAGAGGGAACACCACATCCAATGCTAGATTCCCTTCACCTTCCCCTGTTTCACGCCCTGTTTCTCATTTCTCTGCTCAAGATTACCCTGTTTTCACCCCAAGCTATGAGGATGATCCACTACCAGCTTATAATAATCAGAACCACTTGAAAAGCCTGACAATTTCAGATAGTTGGGATGAGAATGTTCTAGAACACACCATGGAAGCAATTGTACCATATTACAAGGAGAAATCAAGTTCAAGAAAGGGACTTCCTTCTGGTTTTGCCAACATAGAATCTCACATATGCGCAGGCGCTGATGATAGCAAATCTGCAACCAGTTCTTGTGCAAATCACATAACTGTTCTTCAAGCATCATCACCTGCCAATGAATACTTGCAGTGTAGAAGGAACAGCTTGGAGGACTTCAATTCTGTATCGTCGTGCAATCAATGTAAGCCGGCTGTCATAACAAGCGAATTTGAGACTGCAAGGACCAGCAAGAGTTCCACTAGTGTTGTCCCGGTCACGGATTCTCATTCGTCTATTCAATCTCAACAGAAAAGCAAGGGGATGATTTCTTGGTTGTTTCCTCGGCTAAAGAAGAAGACTAATAAGAATGAGAATTCCCCGAGTCGCGCAGAATCTGAGGATGTTTCTCAGGTTCTTAAGGACTTGGGAATCATGTCTATTGAGTCATTGAAGAAAGAGTTGATGGAAGCAAATGAGAATAGAGATGTGGCCTTAATGGAGGTTTCTGAGATGAGGTCTTCGCTCGGCGAGCTGAAACAGAAACTGGAGTACTTGGAGGGTTATTGTGAGGAGCTTAAGAAAGCCTTAAGGCAAGCAATGCAAGCAAGGGATTCTCAGCATCTTTGTGAACAACAGCTCAATAATCCTCAAACGGAGAAAAAGTTTGATAAAAAGGGAGGAAATTTGATGCCAGTGAGCGAGGAAGCAATGGTAGAAGGATTCTTGCAGATAGTATCAGAGTCAAGATTATCAGTAAAGCAGTTCTGTAAGACTCTTATAAACAACATCGACGAAACTGATCAATCTTTGACACAACATTTGAACTTGCTTCTTCAACCATATAAGCTTTCCTTGAGTGCCAAGTATTCCAAGGCAGTATTATACCACTTTGAAGCTTTCATAAACCAATGTCTCTACCAAGACTTCGAGAATTGCGTGTTCCAAAAGAATGGCTGCCCAAAACTGCTGGATCCGCAGCAGGATCAGCGAGTGCAGTTCTCATCATTTGTTTCCCTTAGGAACTTGAGCTGGAATGAAGTTCTAAGAAAGGGAACAAAGTACTACAGTGAAGAGTTTAGCAAGTTCTGTGACCAAAAAATGAGTTGTATTAACACAACTCTAAATTGGACTAGACCTTGGCCTGAACAACTCCTTCAATCTTTCTTTGTGGCAGCAAAATGCATGTGGTTGATGCATTTGCTTGCATTTTCTTTCAATCCACCATTGGGAATTTTGAGGGTTGAAGAGAATAGAAACTTTGATCCTCATTACATGGAAGATATGTGTCCAAGATCTCAGGGTCCAAGCAGGGTTAAGATCATGGTGATGCCAGGGTTTTTTGTTCAGGATAGGGTCTTGAGGTGTAAAGTTATTTGCAGGTACAAATCTGTAGCCTAA 1743 0.42 MASTAFNDKNGNPELSRQEIQNAIAKAVELRALHATLMRGNTTSNARFPSPSPVSRPVSHFSAQDYPVFTPSYEDDPLPAYNNQNHLKSLTISDSWDENVLEHTMEAIVPYYKEKSSSRKGLPSGFANIESHICAGADDSKSATSSCANHITVLQASSPANEYLQCRRNSLEDFNSVSSCNQCKPAVITSEFETARTSKSSTSVVPVTDSHSSIQSQQKSKGMISWLFPRLKKKTNKNENSPSRAESEDVSQVLKDLGIMSIESLKKELMEANENRDVALMEVSEMRSSLGELKQKLEYLEGYCEELKKALRQAMQARDSQHLCEQQLNNPQTEKKFDKKGGNLMPVSEEAMVEGFLQIVSESRLSVKQFCKTLINNIDETDQSLTQHLNLLLQPYKLSLSAKYSKAVLYHFEAFINQCLYQDFENCVFQKNGCPKLLDPQQDQRVQFSSFVSLRNLSWNEVLRKGTKYYSEEFSKFCDQKMSCINTTLNWTRPWPEQLLQSFFVAAKCMWLMHLLAFSFNPPLGILRVEENRNFDPHYMEDMCPRSQGPSRVKIMVMPGFFVQDRVLRCKVICRYKSVA 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00607 580 MobiDBLite consensus disorder prediction 198 221 - -
Aip03g00607 580 PANTHER - 10 580 - -
Aip03g00607 580 Coils Coil 262 282 - -
Aip03g00607 580 Coils Coil 290 320 - -
Aip03g00607 580 PANTHER CYCLIN-DEPENDENT KINASE-LIKE PROTEIN 10 580 IPR042316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00607 Aip-Chr3 5949808 5952260 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00607 - - vra:106756465 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00607 03 5949808 5952260 Aip03g00607 03 5949808 5952260 ECH
Aip08g00342 08 2584430 2586326 Aip03g00607 03 5949808 5952260 PCT