Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00606 ATGGATAAATACTTGGTCCCGTTGAAACCCTCAGCGGAAAAGGTTCATCCTCTTCCTAGAATTGCAAGGTGCCGTTGGAAAAGGAGCAATGTTGAACTGAATGGAAGATTTGAACCTAACTATTGCCATGAGATGCTGGATTTGCTAAGTCGTTCCTACTCTGAGGTGGGTGCTTTTCCGCATCTGTATCATGCAGATGAGACGCCTTGCGAATCGCATATCCAACGGGCTATTACCAGAGCAAATGGTGATGGAAATCTTCCATCCAAGCAAGGCATCTCTGCAGTGGACTTTGACAACAAGGGAATATACTTGGCATCTGTGACAAAGTTGGGATGCTTAACAGTTCATGACTTTGAAGCTCTTTATTGTCAGACACATAAACAAACTTGCTTGAAAGAAGACGAAAGCAAGCATTTACTGCATCTCTCACTAAAACGACAACTTGATACTGTTAGATGGAATCCTATTAACCAGGATGAGGTTGTCTGTGCATCTGTAAAAAGTAGTGAAGTACTTATATTTGATGTTGGATATGTATCATCAGAGCCAATTGAAGTGTTGAGGACACGAAATACAGCAACAGTTCATGGGTACAACGGACACAAAGGTCTCTCTGATGTTGCCTTCACGTCAAATGACTCATGGATACTTGCCTCTGATACACATGGTGGGATCAATGTTTGGGATAGAAGAGTGAAAGCTCTACCTTCTCTTGAGCTTACATCTGGTTCATCTAGTACCCTAAACAGCATCCAAATAAATGTTGAAAATCAGATTATTTTTGGTGCTGGGAAGAGTGGCTTTGTGTACATGTGGGACATTCGTGGCGGAAGAGCATCTACTACTTTTCAGAGTCACAAAGAGATGTGTCATCCTCCTATAACATCGTTGAAGTTGGCAACATTACTAGAGAAGATTGGATCTTTGAAGGCACAAGCTAATATTGTTTGCAAAGAGATTCATTCTATTCGATTCAATCCATGTTGCCCATATCAGCTAGCATTCCATCTTGATGATGGCTGGTCGGGTGTTTTAGATATTAATACTTTACAAGTTACACACATTCATTGCCCTCCCCCAGCTTGGTTAAATGATTCCTATCTTCCTATAGATCTATCATATATAAGAAAACCTTCATGGTTATCTACATGTTCGATCTATTTGGTTGGTTCATCATCTGATAGTGGCATTCATCTCTTAGATTTCTACCCTAGTACCAGCTCGCCGAGCCATGTGCATTACAAAGAGGATACTGATAATGTTTCCAAGATGAATAGGAGTCAAAATAATCAAAACAGATTTATTCCTTTATCTGAAGGAGTTATTTCATGTGCTGCACATCCTTTATATAATGCCATCGTAGTAGGAACAAAGAAGACATCTTTGCTCGTGATTTCACAAAGACGAAGGTCAAACAGTGAAGAAGATTAG 1434 0.4017 MDKYLVPLKPSAEKVHPLPRIARCRWKRSNVELNGRFEPNYCHEMLDLLSRSYSEVGAFPHLYHADETPCESHIQRAITRANGDGNLPSKQGISAVDFDNKGIYLASVTKLGCLTVHDFEALYCQTHKQTCLKEDESKHLLHLSLKRQLDTVRWNPINQDEVVCASVKSSEVLIFDVGYVSSEPIEVLRTRNTATVHGYNGHKGLSDVAFTSNDSWILASDTHGGINVWDRRVKALPSLELTSGSSSTLNSIQINVENQIIFGAGKSGFVYMWDIRGGRASTTFQSHKEMCHPPITSLKLATLLEKIGSLKAQANIVCKEIHSIRFNPCCPYQLAFHLDDGWSGVLDINTLQVTHIHCPPPAWLNDSYLPIDLSYIRKPSWLSTCSIYLVGSSSDSGIHLLDFYPSTSSPSHVHYKEDTDNVSKMNRSQNNQNRFIPLSEGVISCAAHPLYNAIVVGTKKTSLLVISQRRRSNSEED 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00606 477 ProSiteProfiles Trp-Asp (WD) repeats profile. 242 283 IPR001680 GO:0005515
Aip03g00606 477 PANTHER WD40 REPEAT PROTEIN 12, 37 1 476 - -
Aip03g00606 477 SMART WD40_4 234 274 IPR001680 GO:0005515
Aip03g00606 477 SMART WD40_4 80 118 IPR001680 GO:0005515
Aip03g00606 477 SMART WD40_4 192 230 IPR001680 GO:0005515
Aip03g00606 477 Gene3D - 122 474 IPR015943 GO:0005515
Aip03g00606 477 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 476 - -
Aip03g00606 477 SUPERFAMILY WD40 repeat-like 90 457 IPR036322 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00606 - - gmx:100780441 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00606 03 5931138 5942129 Aip03g00606 03 5931138 5942129 ECH