Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00565 ATGTCGATAGTGCCAATCAAGCAGGATGGTGAGGGCGAGGGCTCTAACTCTTTGGTTGATGCATTCTTGGGTTCCCGTATGGAGCTGTGGGACCCCTTCCACTTCATGCCCGCCCCGTTTTCCAACATGTTGTCGGGTTTGGGATTGGGGTCATCCGTGAACACCCGCTTGGACTGGAGGGAGAATTCGAAGGCACACGTGTGGAAGGTGGTGCTACCTGGCTTCACCGATGAGGACGTTCTGGTTGAGCTCCAAGAGGAGAGGGTGCTTCAGGTGAGCGTGGAAAGCGGCAACTTCATGAGCAGATTCAAGGTACCTGATGACGCTAACCTTGAGCAACTCAAGGCCAATATGCACAACGGGGTTCTGCTTATCACTGTTCCCAAGTATCAACAAGCCTCCAACATTAGGGTCGTTGAGATTGAAGGCTCTGATTGA 438 0.5274 MSIVPIKQDGEGEGSNSLVDAFLGSRMELWDPFHFMPAPFSNMLSGLGLGSSVNTRLDWRENSKAHVWKVVLPGFTDEDVLVELQEERVLQVSVESGNFMSRFKVPDDANLEQLKANMHNGVLLITVPKYQQASNIRVVEIEGSD 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00565 145 Pfam Hsp20/alpha crystallin family 58 141 IPR002068 -
Aip03g00565 145 PANTHER 17.5 KDA CLASS I HEAT SHOCK PROTEIN 1 144 - -
Aip03g00565 145 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 1 144 - -
Aip03g00565 145 Gene3D - 22 143 IPR008978 -
Aip03g00565 145 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 48 144 IPR002068 -
Aip03g00565 145 SUPERFAMILY HSP20-like chaperones 34 134 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00565 Aip-Chr3 5476939 5477810 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00565 K13993 - gmx:100797426 164.081