Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00564 ATGATAATGGCATCAAAGTACCGTTTGATTGTTATTCCACCACCCCTTCAAGGCCACATGACACCTATGCTTCAATTAGCCACCATCCTTCACTCCAAAGGCTTCTCCATCACCGTGGTACACACCAAATTTAATTCTCCTGACCCAACTAACCACCCTGATTTTACTTTTGTATCCTTCCATGACGGTTTATCCGATTCATACACCGTTTCTTCTAAGAACTTTATTCATATTTCTTCATACCTCAACACCAATTGTGTCACACCACTTAAGGAGATTTTGGTTAGGATCATTAAGGAAGAGAAAATTTCATGTGTTATCTATGATGGTTTAATGCACTTCATTGATTCTGTGGCTAGAGAACTCAACCTTCCTACCATGCTCTTCAGAACTACATGTGCTACTAATTATCTCTCTTACCATTGGTTACCTACGTTACAAAGAAACGGATATCTTCCCTTACAAGATTCTAGCTGTGTGTGTATGGAGATGGTGGAAGGACTTGAACCTCTACGATTCAAAGATTTACCAATTTTTAATTTGGGAGAATCTGAAACAGATATCATGGTGAAACAAGCAACTGAATCACTCTCAGTAAAGCCATCATTAGGTGTCATCTTCAACACTATCGAATTCCTCGAATCTTCATCGCTCCAAAAACTTCGGAACCTCTACAAAGTTGGTGTGTTTCCCATAGGACCCTTACACATGTGCATGACGTCATCAGAAACACAAGAGAAGAATAATAATTGTTCAACAAGCCTCGTGAAAGAAGACTATAGCTGCATAACATGGCTGAACGAACAAGAGCCACGTTCAGTTCTGTATGTGAGTTTAGGAAGCATAGCAAGTTGGGAAGAAAAAGAACTAATCGAAGTGGCTTATGGTTTAGCAAACAGCGAACAAAAGTTTCTATGGGTGATAAGACCAGAAACAATAAAGTCGATTCCGGAAGAAGTGAAAAGTGCGGCAAGAGAGAAGGGTAAAATAATAAAATGGGCACCGCAGAAGGAAGTTCTGGCGCATAGAGCAGTGGGAGGGTTCTGGAGCCACTGTGGATGGAACTCGACGTTAGAAAGCGTGTGTTTTGGGGTTCCGATGATGTGTCAGCCGTACTTTGGGGACCAAAGAGTGAACGCGAGGTTGGTGAGTGATGTATGGAAGGTGGGGATAGAGTGCTCAGAGATGAGGATAAGAAAGGATGAGGTGGAAGGTGCGGTGAGGAGGATGATGGTAAGTGAAGAAGGAAAGTTGATGAGGGAGAGAGCGGTGTTGATGAAGGATAAAATTAGGGTAGGTATTAGAGATGAAGATGCTTTAAATAAGCTTGTTCATACTATCATAATGTCTTCTTCTAATTCTTCTACACCACACAATAATCATAACTCGTCATAG 1395 0.4129 MIMASKYRLIVIPPPLQGHMTPMLQLATILHSKGFSITVVHTKFNSPDPTNHPDFTFVSFHDGLSDSYTVSSKNFIHISSYLNTNCVTPLKEILVRIIKEEKISCVIYDGLMHFIDSVARELNLPTMLFRTTCATNYLSYHWLPTLQRNGYLPLQDSSCVCMEMVEGLEPLRFKDLPIFNLGESETDIMVKQATESLSVKPSLGVIFNTIEFLESSSLQKLRNLYKVGVFPIGPLHMCMTSSETQEKNNNCSTSLVKEDYSCITWLNEQEPRSVLYVSLGSIASWEEKELIEVAYGLANSEQKFLWVIRPETIKSIPEEVKSAAREKGKIIKWAPQKEVLAHRAVGGFWSHCGWNSTLESVCFGVPMMCQPYFGDQRVNARLVSDVWKVGIECSEMRIRKDEVEGAVRRMMVSEEGKLMRERAVLMKDKIRVGIRDEDALNKLVHTIIMSSSNSSTPHNNHNSS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00564 464 CDD GT1_Gtf-like 7 445 IPR002213 GO:0008194
Aip03g00564 464 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 443 - -
Aip03g00564 464 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 55 414 IPR002213 GO:0008194
Aip03g00564 464 PANTHER UDP-GLYCOSYLTRANSFERASE 76E5 6 448 - -
Aip03g00564 464 Gene3D Glycogen Phosphorylase B; 257 432 - -
Aip03g00564 464 Gene3D Glycogen Phosphorylase B; 9 246 - -
Aip03g00564 464 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 6 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00564 Aip-Chr3 5471340 5474854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00564 1 448 Glycosyltransferase AT5G05880 44.181 1.43e-122 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00564 - - gmx:100786860 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00564 03 5471340 5474854 Aip03g00564 03 5471340 5474854 ECH