Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00512 ATGCATCAACCTCAAGGTGTAGTTGCTCTCCATACTCCATCACTCTCACTATCACTCTCCAAACTCAGAAGAACAACATCACATTCACATTCAAATTCGATCACCATGTTGCACGCGCCGCCGACACATCCCAAGTGGTCTCTCCAAGGAATGACAGCCCTTGTCACCGGTGGAACCCGCGGAATCGGGCACGCCATTGTGGAGGAACTGGTTGGGTTTGGAGCAAGAGTGCACACGTGTGCAAGGAACGAAGCTGAGCTCACCAAGTCTCTCATCCAATGGAATGATTCTGGTTTTGATGTTACTGGCTCTGTTTGCGATGTCTCTGTCCCTCATCAGAGGGAGAAGCTGATGGACTCTGTGTGTTCTCAATTCCAAGGAAAACTCAACATCCTTATAAACAATGTAGGGACAAACATTAGGAAACCAATGACAGAACTCACTACTGCAGAGATTTCCAGACTCATGGATACCAATTTAGGGTCCACCTTTCATATATGCCAACTTGCATATCCACTTCTGAAAGCATCTGGAATTGCAAGTGTTGTGTTTGTCTCGTCGGTTTCTGGTTTCGTCTCCCTGAAGTCCATGTCGGTTCAAGGAGCAACCAAAGGAGCAATTAATCAACTTACAAGGAATCTAGCTTGTGAGTGGGCAAAGGACAATATAAGGAGTAATGCAGTTGCACCCTGGTACATCAAAACCTCAATGGTTGAAAAAGTGCTGAGCAACAAGGAGTATGTGGAAGAGGTGTACTCGAGAACCCCACTTGGGCGACTAGGAGATCCAGCAGAAGTGTCTTCTGTTGTTGCTTTTCTGTGCTTACCAGCATCATCATACATCACTGGCCAGATTATTTGTGTTGATGGAGGGATGACCGTAAATGGATTCTACCCAACTCATACATAG 909 0.4609 MHQPQGVVALHTPSLSLSLSKLRRTTSHSHSNSITMLHAPPTHPKWSLQGMTALVTGGTRGIGHAIVEELVGFGARVHTCARNEAELTKSLIQWNDSGFDVTGSVCDVSVPHQREKLMDSVCSQFQGKLNILINNVGTNIRKPMTELTTAEISRLMDTNLGSTFHICQLAYPLLKASGIASVVFVSSVSGFVSLKSMSVQGATKGAINQLTRNLACEWAKDNIRSNAVAPWYIKTSMVEKVLSNKEYVEEVYSRTPLGRLGDPAEVSSVVAFLCLPASSYITGQIICVDGGMTVNGFYPTHT 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00512 302 Gene3D - 42 296 - -
Aip03g00512 302 PANTHER TROPINONE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC 28 301 - -
Aip03g00512 302 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 138 IPR002347 -
Aip03g00512 302 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 180 188 IPR002347 -
Aip03g00512 302 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 200 219 IPR002347 -
Aip03g00512 302 PANTHER TROPINONE REDUCTASE 28 301 IPR045000 GO:0016491
Aip03g00512 302 PRINTS Glucose/ribitol dehydrogenase family signature 52 69 IPR002347 -
Aip03g00512 302 PRINTS Glucose/ribitol dehydrogenase family signature 127 138 IPR002347 -
Aip03g00512 302 PRINTS Glucose/ribitol dehydrogenase family signature 174 190 IPR002347 -
Aip03g00512 302 PRINTS Glucose/ribitol dehydrogenase family signature 200 219 IPR002347 -
Aip03g00512 302 PRINTS Glucose/ribitol dehydrogenase family signature 221 238 IPR002347 -
Aip03g00512 302 PRINTS Glucose/ribitol dehydrogenase family signature 256 276 IPR002347 -
Aip03g00512 302 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 49 295 IPR036291 -
Aip03g00512 302 Pfam Enoyl-(Acyl carrier protein) reductase 59 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00512 Aip-Chr3 4926836 4928134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00512 45 301 Miscellaneous Gene Families AT2G29290 63.566 7.48e-120 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00512 K08081 - gmx:100799534 447.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00512 03 4926836 4928134 Aip03g00512 03 4926836 4928134 ECH