Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00508 ATGGTTACTTCCATGAACCATCATTTGGTCCCCAAGTACCCGTTTCTTCTTCTCTCTTGCAATGGTCATAATCCTAAGCTCAGATTCCACTCTTGTGGGCAGGTTGGAGCACAGAAGGGGTATGCTTCTTCTGGGGAGGAACCTCAGTCGCGTGTTTCTGACACAAGTACATACCAAGAGGAATTCTCTTGGTCTTCTGTGGTTTTTCCGTTTCTATTCCCAGCATTGGGTGGCTTGTTATTCGGTTATGATATTGGTGCCACCTCAGGGGCCACAATCTCACTGCAGTCACCTGAGCTTAGTGGCATAACTTGGTTCAATCTTTCGGCTATTCAGCTTGGACTTGTGGTCAGTGGTTCCCTCTATGGGGCTCTTCTTGGCTCACTTATTGCATATGCCGTTGCTGATTTCCTTGGGAGGAAGAGACAACTCATTGTTGCAGCACTGTTATATGTGCTTGGCGGTTCGATCACTGCGTATGCACCAGAGCTCAATGTCCTCTTAGCAGGAAGGCTGCTTTATGGACTTGGTATAGGTTTGGCCATGCACGGTGCTCCTTTGTATATTGCGGAAACATGTCCATCACAAATCCGTGGGACTCTAGTATCATTAAAAGAACTCTTCATTGTCTTGGGGATTCTGCTTGGTTATTTTGTGGGAAGCTTTGAGATTAATGCCGTTGGGGGATGGCGGTTTATGTATGGCTTTAGTGCTCCGATTGCTGTACTAATGGGGCTAGGAATGTTGAGTCTCCCTCCCTCTCCGAGGTGGTTGCTTCTCAGGGCAGTTCAAGGGAAGGGTTCATTTCAAGATTTGAAGGAAAAGGCAATTCTCTCCCTGAGTAAATTAAGGGGCCGACCACCCGGCGACAAAGAATCTGAGAAGCAAATAGAAGAGAGCCTTGTTTCATTGAAGTCTGCATATGCAGATCAGGAATCAGAAGGGAGTTTCTTGGAGGTGTTTCAGGGTGCCAATCTGAAAGCTTTCATAATTGGTGGGGGGCTTGTCTTATTTCAACAGATAACTGGCCAACCAAGTGTTCTGTATTATGCAGGTCCAATTCTTCAGAGTGCCGGATTTTCTGCTGCAGCCGATGCTACCAAAGTTTCAGTTGTTATTGGCTTATTCAAGTTGCTAATGACATGGATTGCTGTCTTAAAAGTTGATGATTTGGGGAGAAGGCCTCTTCTGATTGGAGGTGTCACTGGCATTGCCCTTTCTTTAGCTCTTCTTTCTGCTTATTATAAATTTCTTGGAGGGTTCCCACTTATTGCTGTCGCGGCTTTACTTCTTTATGTTGGTAGCTATCAGGTATCATTTGGCCCAATAAGTTGGCTAATGGTATCAGAAATTTTCCCATTGCGCACGAGAGGACGGGGGATCAGTCTGGCTGTTCTAACAAACTTTGCTTCAAATGCAGTTGTGACCTTTGCATTCTCTCCTTTAAAGGAGTTTCTAGGAGCAGAAAACCTTTTTCTCCTTTTTGGGGCTATTGCTTTACTGTCACTTATCTTTGTTATATCTTCAGTTCCCGAAACAAAAGGCTTGAGCCTAGAAGATATTGAGTCCAAAATCTTGAAATGA 1584 0.4489 MVTSMNHHLVPKYPFLLLSCNGHNPKLRFHSCGQVGAQKGYASSGEEPQSRVSDTSTYQEEFSWSSVVFPFLFPALGGLLFGYDIGATSGATISLQSPELSGITWFNLSAIQLGLVVSGSLYGALLGSLIAYAVADFLGRKRQLIVAALLYVLGGSITAYAPELNVLLAGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLVSLKELFIVLGILLGYFVGSFEINAVGGWRFMYGFSAPIAVLMGLGMLSLPPSPRWLLLRAVQGKGSFQDLKEKAILSLSKLRGRPPGDKESEKQIEESLVSLKSAYADQESEGSFLEVFQGANLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATKVSVVIGLFKLLMTWIAVLKVDDLGRRPLLIGGVTGIALSLALLSAYYKFLGGFPLIAVAALLLYVGSYQVSFGPISWLMVSEIFPLRTRGRGISLAVLTNFASNAVVTFAFSPLKEFLGAENLFLLFGAIALLSLIFVISSVPETKGLSLEDIESKILK 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00508 527 Gene3D MFS general substrate transporter like domains 61 525 IPR036259 -
Aip03g00508 527 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 3, CHLOROPLASTIC 46 527 - -
Aip03g00508 527 PANTHER D-XYLOSE-PROTON SYMPORTER-LIKE 2 46 527 - -
Aip03g00508 527 TIGRFAM SP: MFS transporter, sugar porter (SP) family 55 521 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00508 527 SUPERFAMILY MFS general substrate transporter 61 522 IPR036259 -
Aip03g00508 527 Pfam Sugar (and other) transporter 73 522 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aip03g00508 527 PRINTS Sugar transporter signature 78 88 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00508 527 PRINTS Sugar transporter signature 168 187 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00508 527 PRINTS Sugar transporter signature 339 349 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00508 527 PRINTS Sugar transporter signature 426 447 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00508 527 PRINTS Sugar transporter signature 449 461 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aip03g00508 527 CDD MFS_GLUT10_12_Class3_like 73 521 - -
Aip03g00508 527 ProSiteProfiles Major facilitator superfamily (MFS) profile. 70 514 IPR020846 GO:0022857
Aip03g00508 527 ProSitePatterns Sugar transport proteins signature 2. 173 198 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00508 Aip-Chr3 4896395 4899981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00508 19 527 Organic Solute Cotransporters AT5G59250 77.626 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00508 - - aip:107629076 976.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00508 03 4896395 4899981 Aip03g00508 03 4896395 4899981 ECH