Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00505 ATGCATGCTTTCCATAAAACCACACTACTCCCCAGGATTCCCATAACAAACGCCATCATCCACCGCTCCTTCCGATCAGATCCCTTATTCTATGCCCAACTCATCGAAACCTACGCTCGTGATCGAGCGTTGCACCACGGCAAGAAGCTCCACGCCCACCTAATCACCAACGGCATCGCTTGCTTCAGCCTTGTCGCTTCCAACTTAGTTTCCTTCTATGCTTCCTGCGGCCAACTCTCCCATGCACGAAAACTGTTCGATAAAATTCCGAAAACAAATGTGCGCCGGTGGATTTCCTTTATCGGAACCTGTGCTCGCTGCAGCTTCCACCACGACGCCATTGCCGTGTTCTCAGAAATGCTGGCAACCCAAACGCCCAATCCCAATGCCGTTTTTGTCATTCCAAGCGTTCTAAAAGCTTGCGGCCATGTCGGGGACCAAATCACGGGTCAGAAGATTCATGGGTTGATTCTGAAGTGTTGTTTTGAGGTTGACCCTTTTGTGTCTAGCTCGTTGATTGTAATGTACTCGAAGTGCTTGAGAGTTGGGGACGCACGCAAGGTGTTTGACGGAATGGAGGTTAAGGATTTGGTGGCTTTGAACGCACTTGCTGCTGGGTACTCCCAAGTGGGGCTTGCGGATGATGCTTGGAGTTTGGTGGAGAGGATGAGATTGATGGGTTGA 684 0.5044 MHAFHKTTLLPRIPITNAIIHRSFRSDPLFYAQLIETYARDRALHHGKKLHAHLITNGIACFSLVASNLVSFYASCGQLSHARKLFDKIPKTNVRRWISFIGTCARCSFHHDAIAVFSEMLATQTPNPNAVFVIPSVLKACGHVGDQITGQKIHGLILKCCFEVDPFVSSSLIVMYSKCLRVGDARKVFDGMEVKDLVALNALAAGYSQVGLADDAWSLVERMRLMG 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00505 227 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 196 227 IPR002885 -
Aip03g00505 227 Gene3D Tetratricopeptide repeat domain 97 227 IPR011990 GO:0005515
Aip03g00505 227 Pfam PPR repeat 68 90 IPR002885 -
Aip03g00505 227 Pfam PPR repeat 198 227 IPR002885 -
Aip03g00505 227 Pfam PPR repeat 170 195 IPR002885 -
Aip03g00505 227 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 31 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00505 Aip-Chr3 4887972 4888743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00505 72 227 Glycoside Hydrolase AT3G49170 31.250 9.58e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00505 - - aip:107629077 456.832