Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00486 ATGAAGGAAGGTAAATCCGCTAAGCTGAATCATCAACAGCAGCACCAGAATGGTCACCTTTCACCTTCTAAATTCGCTAAATTGTTTGATCCTGAAGCTTCATGGGACAAGGATCAATTGGGAGACGTGTTGCACTGGATTAGACAAGTCATTGGCCTTGTATGTGGATTAATTTGGGGTGCCATACCTTTGGTTGGAGGAATATGGTTTATCCTTTTCTTACTGTTGTCAACTTCATTCATATATGGCTATTATGCAATAATATTGAAGGTTGATGAGGAAGAGTTTGGTGGCCATGGTACCCTCCTCCAAGAGGGGCTTTTTGCATCTACAACCCTTTTCCTGCTTTCCTGGACTTTAGTTTACAGTTTGGCACACTTCTGA 384 0.4193 MKEGKSAKLNHQQQHQNGHLSPSKFAKLFDPEASWDKDQLGDVLHWIRQVIGLVCGLIWGAIPLVGGIWFILFLLLSTSFIYGYYAIILKVDEEEFGGHGTLLQEGLFASTTLFLLSWTLVYSLAHF 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00486 127 MobiDBLite consensus disorder prediction 1 22 - -
Aip03g00486 127 PANTHER PROTEIN C20ORF24 RAB5-INTERACTING PROTEIN 1 127 IPR010742 GO:0097250
Aip03g00486 127 Pfam EMC6 43 122 IPR029008 -
Aip03g00486 127 PANTHER BNAA04G16800D PROTEIN 1 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00486 Aip-Chr3 4716028 4718624 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00486 - - gmx:100808602 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00486 03 4716028 4718624 Aip03g00486 03 4716028 4718624 ECH