Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00485 ATGGCGAGTACAACCACGCTCTTAGAGCTTCAACCATGGAACTACAACTACCACCGCGCCTTCTCCCTCAGGATCTCCTCCAAGATCCACCGTGTCTCCGCCACCTCCGACCACCGCCCCGCCGCTCCTTCCTGCATCTTCGTTGGTCCTCTCGAAACCGCCAACCAAGAAACTCTCGAAGCTCTCTACTCTCAAGCACGGGATGCTTATTATAGTGGCGAACCTTTGATAGTTGATGACATGTTTGATAGAGTGGAGTTAAAGCTGAGATGGTACCGTTCAAAATCGGTTATCAAGTATCCTCGATGCAGCATCAGGAGGCAATCAGCATATGCTGATGCAGAGGAAGATCTGTCTATGGTTTTTGCATTGGCAAGCACATGGACCATGTTCCTTGCATTCGGCAGTTTAGTATGCCTTGGGCCGACATTATACACTGTTGGCATGACTTATCAGAATGCATTCAGTTCGGGATTATCACTTGATAGCCAACCATCTGGTCTAGAACTAACCATGGTGAATAGCATATTCGTCGTGCTATGTTTTGTAATTGGATACCCAATTGTTTCGGCTTCAGTTAAGGTGCTTCAGGGCCTGTGGGTGAATGATTTGGTGGCATTGAAAGGTGCATGTCCAAATTGTGGAGAAGAGGTATTTGCATTTGTGAGAATGGACAGGAATATCGACTCACCACATAGAGCAAATTGTCATGTGTGTGGAAGTATCTTAGAATTCCGCACAAAAGTAGAGCCATCATCAGTCTCAAGATTAGGCAGAAAATGGGTTTATGGGCGGATTTACCTTGTCTCAGCAAGAGGAAGATTTCGATAG 831 0.4633 MASTTTLLELQPWNYNYHRAFSLRISSKIHRVSATSDHRPAAPSCIFVGPLETANQETLEALYSQARDAYYSGEPLIVDDMFDRVELKLRWYRSKSVIKYPRCSIRRQSAYADAEEDLSMVFALASTWTMFLAFGSLVCLGPTLYTVGMTYQNAFSSGLSLDSQPSGLELTMVNSIFVVLCFVIGYPIVSASVKVLQGLWVNDLVALKGACPNCGEEVFAFVRMDRNIDSPHRANCHVCGSILEFRTKVEPSSVSRLGRKWVYGRIYLVSARGRFR 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00485 276 PANTHER PGR5-LIKE A PROTEIN 23 271 - -
Aip03g00485 276 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 23 271 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00485 Aip-Chr3 4712636 4714591 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00485 - - gmx:100810752 410.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00485 03 4712636 4714591 Aip03g00485 03 4712636 4714591 ECH
Aip08g00411 08 3153971 3155701 Aip03g00485 03 4712636 4714591 PCT