Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00450 ATGGCACCTAAGGCAGAGAAGAAGCCAGCTGAGAAGAAGCCCGCGGAGGAGAAGAAATCCGCCGTTGCTGAGAAGGCTCCACCGGCAGAGAAGAAGCCGAAGGCAGGAAAGAAGCTTCCAAAGGAAGGCGCCGCTGCCGCCGGAGACAAGAAGAAGAAGAGGAACAAGAAGAGCGTTGAGACCTACAAGATCTACATCTTCAAGGTCCTGAAGCAAGTCCACCCTGACATCGGTATCTCAAGCAAGGCCATGGGAATCATGAACAGCTTCATCAACGATATCTTTGAGAAGCTCGCTCAAGAATCTTCTAGACTTGCCCGCTACAACAAGAAGCCAACCATAACCTCCAGGGAGATCCAAACCGCAGTCAGGCTAGTCCTGCCCGGAGAGTTGGCAAAGCACGCTGTTTCCGAGGGTACCAAGGCGGTTACCAAGTTTACCAGTTCTTAA 450 0.5222 MAPKAEKKPAEKKPAEEKKSAVAEKAPPAEKKPKAGKKLPKEGAAAAGDKKKKRNKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00450 149 SUPERFAMILY Histone-fold 33 149 IPR009072 GO:0046982
Aip03g00450 149 PRINTS Histone H2B signature 62 80 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aip03g00450 149 PRINTS Histone H2B signature 81 101 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aip03g00450 149 PRINTS Histone H2B signature 103 120 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aip03g00450 149 PRINTS Histone H2B signature 120 133 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aip03g00450 149 PRINTS Histone H2B signature 133 146 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aip03g00450 149 PANTHER HISTONE H2B 5 149 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aip03g00450 149 MobiDBLite consensus disorder prediction 1 57 - -
Aip03g00450 149 SMART h2b3 52 148 IPR000558 GO:0000786|GO:0003677|GO:0030527
Aip03g00450 149 Pfam Core histone H2A/H2B/H3/H4 2 125 IPR007125 GO:0003677
Aip03g00450 149 Gene3D Histone, subunit A 22 149 IPR009072 GO:0046982
Aip03g00450 149 PANTHER HISTONE H2B 5 149 - -
Aip03g00450 149 ProSitePatterns Histone H2B signature. 117 139 IPR000558 GO:0000786|GO:0003677|GO:0030527
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00450 Aip-Chr3 4432545 4433445 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00450 K11252 - fve:101292388 210.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00450 03 4432545 4433445 Aip03g00450 03 4432545 4433445 ECH