Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00442 ATGTCGTCGCCCTCGGTGACTTCGAGTTCCGCTTCCAAGGGAAGGAAAACGACGACGGAGCTTCATCATGTTCCGAAGAAATGGACGGAGAGAGAAACGAGTCCAGAGAGGACCAAGGTTTGGACTGAACCCAAGCCCAAAACGGCAAGAAAAGTATCCGTCGTTTACTACCTCTCCCGAAGCGGCCACCTCGAGCACCCTCACTTCATGGAGGTTCCTCTCTCCTCACCACAAGGACTCTACCTCAAAGATGTAATCAATCGCTTGAACCTGCTTCGAGGAAAAGGCATGGCTGCAATGTATTCCTGGTCCGCCAAACGGAGCTACAAAAATGGCTTCGTGTGGCACGATTTATCGGAGAACGATTTCATTTACCCGACGCAGGGGCAAGACTACATTCTCAAAGGATCTGAGATTGTTGATCATGATGCGAGAGCTTCCGAGATGCAGAAACCGGAGGAGGAAGAGGCTAATTTCCCGGCGGTCGCAGTGACGCGACGGCGCAACCAGTCGTGGAGCTCCATTGACATGAACGAGTACCTTGTTTACAAGTCGGACTCGTTCGGAGACTCCGCCGGAAAAATCGCCGCTGACGCGTCGACTCAAACGACGGACGATAGGCGGCGGCGGAGGAGGGCGGCTAGGGAAGAGGAGAAGAGTCAGAATAATAAAGGAGTCGAAGACAAAGGAGAAGAAATCACGGAATCGGAGCGGGTCCCGCATGCCACGTGTCATAATCAGAGCATTGAGCTAAGCAGGGACGAGATCTCGCCTCCGCCGTCGGATTCGAGTCCGGAGACGCTTGAAACGCTGATGAAGGCGGATGGACGGCTGGGATTGTGTTCTGCGAAGATTAACAATAATAATGTGACGGCTGAGAATGGTCATAGCGGAAGGATGAGGGCTTCGTCGGTTCTCTTGCAGTTACTATCGTGCGGTGCGGTGTCGTTTAAGGAGTGTGGGGCCGAGTCTGATAAGGATCAAGGGTTCTCATTGGTTGGGCACTACAAAGCTCGGTTACCCCGCGGAGCAGGGAATAATAATTCTAATCAAGTGGGAAAAGAGGTAGGGACATCGATGGAAATTCCAGATTTGAACAGGGTAACATTGGAAGATAAGGAGTATTTTAGTGGGAGCTTGATTGAGACCAAGAAAGTTGAATTCCCTGCGTTGAAGAGGTCCTCTTCTTACAATGCAGATAGTGGTTCCCGGTTGCAAATCATGGAGCAAGAGGGAGACATGGTGCGAGCAAAGTGCATACCAAGGAAGTCCAAGACACTATCAACAAAGAAAGAAGATGGTTCTTCTCAACATGGTAGCAAAAGATTTGAGGTACAAGCCACAAGTTGA 1350 0.5074 MSSPSVTSSSASKGRKTTTELHHVPKKWTERETSPERTKVWTEPKPKTARKVSVVYYLSRSGHLEHPHFMEVPLSSPQGLYLKDVINRLNLLRGKGMAAMYSWSAKRSYKNGFVWHDLSENDFIYPTQGQDYILKGSEIVDHDARASEMQKPEEEEANFPAVAVTRRRNQSWSSIDMNEYLVYKSDSFGDSAGKIAADASTQTTDDRRRRRRAAREEEKSQNNKGVEDKGEEITESERVPHATCHNQSIELSRDEISPPPSDSSPETLETLMKADGRLGLCSAKINNNNVTAENGHSGRMRASSVLLQLLSCGAVSFKECGAESDKDQGFSLVGHYKARLPRGAGNNNSNQVGKEVGTSMEIPDLNRVTLEDKEYFSGSLIETKKVEFPALKRSSSYNADSGSRLQIMEQEGDMVRAKCIPRKSKTLSTKKEDGSSQHGSKRFEVQATS 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00442 449 MobiDBLite consensus disorder prediction 415 439 - -
Aip03g00442 449 MobiDBLite consensus disorder prediction 1 15 - -
Aip03g00442 449 MobiDBLite consensus disorder prediction 201 239 - -
Aip03g00442 449 PIRSF UCP031043 20 444 IPR021182 -
Aip03g00442 449 PANTHER OS01G0839200 PROTEIN 20 424 - -
Aip03g00442 449 MobiDBLite consensus disorder prediction 194 267 - -
Aip03g00442 449 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 20 424 IPR010369 -
Aip03g00442 449 MobiDBLite consensus disorder prediction 16 44 - -
Aip03g00442 449 MobiDBLite consensus disorder prediction 410 449 - -
Aip03g00442 449 MobiDBLite consensus disorder prediction 1 44 - -
Aip03g00442 449 Pfam Protein SOSEKI, plant 52 401 IPR010369 -
Aip03g00442 449 MobiDBLite consensus disorder prediction 240 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00442 Aip-Chr3 4369650 4374006 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00442 - - adu:107476876 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00442 03 4369650 4374006 Aip03g00442 03 4369650 4374006 ECH