Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00427 ATGAAACTAATGGATCTGTTTTGTTCTTCAAATTCTTCCACAGCAACCTCAAGCATGCACCAACATCATCATAGTTCTATGGTACCAAAGAGAAGCAAAAAGACCCAGTTACCCAACATTGTTCTCCCTTGTTCATCTTCTTCTTCCCAATTGATACCTCTGAATCCAAAGCCCAGAAAGAGTACTAGTTGTTCATCATCATCGAACATGGGTGAAGTAGTGATGAGAAGACATAGCTCTGTTGAACTTAGAGACTTATATACTACTAGTGGTTCATCAAGAAGATATCTCCTTGCTAGTGACACCATTCAAAGGGTTTCTGACTCATCTAACAACTCTTTGGTTCTTTCTCATGCTAACTATAAGCCCCACCAAAGAGATCATCATCTTCTTAGATCATCTTCTGTTCGTTCAACAAACCAGGTTGTGGTATTGAGGGTATCATTGCACTGCAAAGCATGCGAAGGAAAACTTAGAAAACATATATCAAGAATGGAAGGAGTGAGATCATTCAGCATAGACATGGAGACAAAGAAGGTGACAATCATTGGTGACGTCACGCCATTAGGGGTATTGGCCAGTGTTTCCAAGGTCAAGAATGCTCATCTCTGGCCATATCCATCCACCACATCATCATCATCATGA 645 0.4062 MKLMDLFCSSNSSTATSSMHQHHHSSMVPKRSKKTQLPNIVLPCSSSSSQLIPLNPKPRKSTSCSSSSNMGEVVMRRHSSVELRDLYTTSGSSRRYLLASDTIQRVSDSSNNSLVLSHANYKPHQRDHHLLRSSSVRSTNQVVVLRVSLHCKACEGKLRKHISRMEGVRSFSIDMETKKVTIIGDVTPLGVLASVSKVKNAHLWPYPSTTSSSS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00427 214 CDD HMA 144 197 IPR006121 GO:0046872
Aip03g00427 214 Pfam Heavy-metal-associated domain 145 191 IPR006121 GO:0046872
Aip03g00427 214 Gene3D - 138 202 - -
Aip03g00427 214 MobiDBLite consensus disorder prediction 51 71 - -
Aip03g00427 214 SUPERFAMILY HMA, heavy metal-associated domain 140 198 IPR036163 GO:0046872
Aip03g00427 214 ProSiteProfiles Heavy-metal-associated domain profile. 141 201 IPR006121 GO:0046872
Aip03g00427 214 PANTHER OS08G0405700 PROTEIN 1 214 IPR044526 -
Aip03g00427 214 MobiDBLite consensus disorder prediction 13 35 - -
Aip03g00427 214 PANTHER HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED 1 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00427 Aip-Chr3 4235615 4237186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00427 - - adu:107477152 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00427 03 4235615 4237186 Aip03g00427 03 4235615 4237186 ECH