Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00420 ATGGACGAAGAATTGCTTGAGCTTCAGCGACAATTCCAATTCGCTCAGCAAGCCAAGTCCAGCATTCGATTATCTGAGCGAAACGTCGTCGAGTTGATCCAAAAGCTTCAACAACTCCAAATCATCGATTTCGAGCTCCTTCACACCGTTTCTGGCAAAGAATACATCACTCTCGATCAATTGAGGAACGAAATGGTTTCTGAGGTTAGAAAATTAGGGCGCGTTTCGGTGATTGACCTTGCGGACACTACTGGTGTTGACTTGTACTATGTTGAGAAGCAGGCTCAGCGCATTGTGGCGGATCACGCTGAGTTCATGCTGAATCAGGGGGAAATCATGTCCGAATCGTACTGGGATTCGGTCGCCGAAGAGGTTAACGAAAGGCTTCAAGAATGCAGCCAGATCGCGCTCACGGAACTCGCTGCACAGCTTAATGTTGGATTGGACTTGGTTGCGTCCATGTTGGAGCCGCGACTCGGCACTATGGTGAAAGGAAGGCTTGAGGGAGGGCAATTGTATACTCCCGCCTATGTGGCCCGCATGAATGCAATGGTTCGGGGGGCAGCAAGGGGAATCACAGTGCCAACAAATTTGACGGTGTTGTGGAGCTCATTGCAGCAGTTACTGCAGGAAATGGGCGGAACCGGTGGTGTGGCGGTTGATGGATCTTTCTTCCAATCTTTGTTTAATGGACTTGTGAAGGAAGGCGAGATTCAAGGATCAGTTCGTGCAGGAGTACATTGGACACCAGCTGTGTTTGCCATTGCTCAGAAGGAATCTGTGGATTCATTTTTTTCACAGAATTCTTTTATCAGCTATGAGGTTCTGCACAAACTTGGAATCCCACAGCCCATTCAGTTCTTGCAGTCCAGATATCCTGAAGGAAAACCTCTAGTCACAACATTTGTTCACCAATCTATGATTGACATGTTAGATGCTGCTACTGAGGATGCTATTGAACGTGGTAGTTGGAGTGATTCTCTTTCCTTGTTGCCCTCATCTTTCACACCTCAAGATGCAGCTAAAATGCTGTCCCTCTGTCAATCTGTTCAATTGGCTCTCAAGTCTAATAAAGCGCACATTTTTGGAGAATTTTATGTATTAAGCAGCAGCTTTATGAAGGACATATGTGATCGCGTGGTGAAAGAGTTGGAGACATTAGGCGTTTCAGGGTCTTTTGGCTCTAAGATGTCTGATGATCTACAAGTAACCAATGAAGCAAAAGGATACGATTCAGGAAGGTTGAACGAGTCCAATGAAATGGCAAGTGATGCTGGGGCCAACAAGCATTCTGATAAAGGGTCCAAGAAAAAAAAGGGGAAAGCCACTGGAAATGCAGCAGCAAATCTATCTGAAAGTGGTCCAGATAACCAGGAACAGGCATCCACAAAATCTAAGAAAAACCAGAGAAAGAGCAAGGATACATCGTCACAAACATCAGATTCAAAGTCAGGTTCAAGGAAAGAATCAGTTAAAATGAAGGACGACCATCTTAGTAGTCCCTCAGAAGAATGGATCGTGCAGAAAATTACTACCCTGTTTCCCGAGTTTGAAGAACAAGGTCTAGATGATCCTGAAACAATTCTTGAGCCTTTGGCTAACAAATTAAGGCCTACAATAATCAGTTCTTGGATGGAGAAAAGGAAGGCATTACTAACAGAAAATGCAGACAGAATGAAACGATTGCTTGATAATTTGCAGAAGAAACTTGATGAGTCTTTCTTAAACATGCAGCTCTATGAAAAAGCCTTGGAATTGTTTGAAGATGATCAATCAACTTCTGTTGTTTTACATAGGCATTTACTAAGAACAGTAGCAGCTCCTATGGTGGATATGCTTCTTCATGATCTGGATGAACACAACAAATTGAAGAATGGTGTTGAGGTTCAGGAGGCTCCAAGTTCTGAATCTATTTCAGTTAGTCCTGGAGACAGAGTTGCAATTTCCAAGAGTTTTCCTAGACCTCTTGCAAATAAGGCTCTTGCTGTTGTAGAAGCATTGGAGGGAAAGAATGTTGAAGTATTCATGGACGCATTTAGAGCAGTAACTGAAGAGAGTGCATTGCCTTTGAAAAGACTCGACAAGAAACTCGAAAGAACACTTTTACATTCATATCGTAAGGAATTAACATCCCAAGTTTCTGCTGAGACTGACCCTGTATCCCTTCTGCCAAAAGTTGTGTCATTACTTTATATCCAGGTTTACCATAAAGCTCTTCAAGCCCCTGGAAGGGCGATCTCTGTTGCTATTTCCCAATTGAAGGATAAGCTCGATGAGTCAGCACACAAGGTATTGACGGATTATCAAGCTGCTACAGTGACTCTCTTAGCACTGTTATCAGCTGCACCTGGTGATGAAGACGATTGTGCATCTGATAGAATTTTGAGTAAAAGGGAACTTCTGGAGAGTCAAATGTGGGATCTCAAAAGCTTAGTTTTGACCAACACACAACAATCTTCATAA 2463 0.4336 MDEELLELQRQFQFAQQAKSSIRLSERNVVELIQKLQQLQIIDFELLHTVSGKEYITLDQLRNEMVSEVRKLGRVSVIDLADTTGVDLYYVEKQAQRIVADHAEFMLNQGEIMSESYWDSVAEEVNERLQECSQIALTELAAQLNVGLDLVASMLEPRLGTMVKGRLEGGQLYTPAYVARMNAMVRGAARGITVPTNLTVLWSSLQQLLQEMGGTGGVAVDGSFFQSLFNGLVKEGEIQGSVRAGVHWTPAVFAIAQKESVDSFFSQNSFISYEVLHKLGIPQPIQFLQSRYPEGKPLVTTFVHQSMIDMLDAATEDAIERGSWSDSLSLLPSSFTPQDAAKMLSLCQSVQLALKSNKAHIFGEFYVLSSSFMKDICDRVVKELETLGVSGSFGSKMSDDLQVTNEAKGYDSGRLNESNEMASDAGANKHSDKGSKKKKGKATGNAAANLSESGPDNQEQASTKSKKNQRKSKDTSSQTSDSKSGSRKESVKMKDDHLSSPSEEWIVQKITTLFPEFEEQGLDDPETILEPLANKLRPTIISSWMEKRKALLTENADRMKRLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDMLLHDLDEHNKLKNGVEVQEAPSSESISVSPGDRVAISKSFPRPLANKALAVVEALEGKNVEVFMDAFRAVTEESALPLKRLDKKLERTLLHSYRKELTSQVSAETDPVSLLPKVVSLLYIQVYHKALQAPGRAISVAISQLKDKLDESAHKVLTDYQAATVTLLALLSAAPGDEDDCASDRILSKRELLESQMWDLKSLVLTNTQQSS 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00420 820 MobiDBLite consensus disorder prediction 446 462 - -
Aip03g00420 820 MobiDBLite consensus disorder prediction 463 477 - -
Aip03g00420 820 MobiDBLite consensus disorder prediction 410 425 - -
Aip03g00420 820 MobiDBLite consensus disorder prediction 410 501 - -
Aip03g00420 820 Coils Coil 22 42 - -
Aip03g00420 820 Coils Coil 549 583 - -
Aip03g00420 820 PANTHER E3 UFM1-PROTEIN LIGASE 1 1 816 IPR018611 GO:0061666|GO:0071569
Aip03g00420 820 MobiDBLite consensus disorder prediction 485 501 - -
Aip03g00420 820 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00420 Aip-Chr3 4125934 4132194 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00420 1 785 EF-hand Containing Proteins AT3G46220 62.468 0.0 953
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00420 K22755 - gmx:100808087 1275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00420 03 4125934 4132194 Aip03g00420 03 4125934 4132194 ECH