Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00419 ATGTCAGGGCTACTTAATTCTTCTCTGAACGGTTCTGCTTCAAATCTTCCAGATGGTGCTGGGAGGTCTTTTGCTACTTCATTCTCTGGTCAGTCTGGTGCAGCCTCCCCTGTCTTTCATCATACTGGATCCCTTCAAGGACTGCACAATATTCATGGGAGCTTTAATGTACCCAACATGCCTGGTACACTCACATCAAGAAACTCAACAATAAATAGTGTCCCATCCGGTGGTGTTCAGCAACAAACAGGTAGCCTTTCTAGTGGAAGGTTTGGTTCCAACAATCTGCCTGTTGCATTATCTCAGCTATCTCATGGAAGTGCCCATGGACACTCGGGAGTTGCCAATAGAGGAGGTATAAATGTTGTAGGAAACCCTGGATTTAGTAGTAGCACAAATGGAGTTGGAGGTTCTATTCCTGGGATTCTTCCAACATCCGCTGCAATTGGTAACCGAAATGCTGTTCCAGGATTGGGAGTATCCCAAATTTTGGGAAATGCAGGTCCTCGAATCACAAGTTCTGTGGGAAACATGGTTGGAGGGGGGAACCTTGGAAGGACTGGTGGAGGATTGTCTGTACCTGGTCTCACATCCCGTCATTTGAGTGCAAACAGTGGATCTGCTGGCTTAGGAGTACAGGGACAGAATCGATTGATGAGTGGTGTGCTTCCACAAGGATCTCCGCAGGTGATTTCAATGCTAGGGAACTCTTATCCCAATGCTGGTGGTCCACTTTCACAAAGCCATGTTATGGGTATGTTGAATGATGTAAACTCGAGTGATAATTCTCCTTTTGACATGAATGACTTCCCTCAACTGACTAGTCGACCTAGTTCTGCTGGAGGGCCTCAAGGACAATTGGGTTCTTTACGGAAGCAGGGTCTTAGTCCCATCGTTCAACAAAACCAAGAGTTTAGTATTCAAAATGAAGATTTCCCAGCTTTGCCAGGATTCAAAGGTGGCAATGCTGATTATGCTATGGATATGCACCAGAAAGAACAGCTTCATGACAATGCTGTACCAATGATGCAATCTCAACATTTCCCGATGGGGAGGTCTGCTGGTTTTAGCTTGGGGGGAACATATTCATCACATCGTACACAACAGCAACAACAACATGCTCCTTCGGTGAGTAGTGGTGGTGTCTCATTTTCATCTGTAAACAACCAGGATCTTCTCCATCTACATGGATCAGATATTTTTCCATCTACACATTCAACTTATCATTCGCAGGCAAGTGGACCTCCTGGGATTGGATTAAGGCCACTAAATTCTCCAAATACAGTCTCTAGTATGGGTCAGTATGACCAGATCCTCCAGCAGTATCAACAGCACCAGAATCAGTCGCAGTTCCGCCTTCAAATGTCAGCCGTAAATCAGTCGTTTCGGGATCAGGGCATGAAAGCTATGCAAACTGCACAATCCACACCAGATCCATTTGGTTTGCTTGGCTTGTTAAGTGTGATCAGGATGAGTGATCCAGACTTGACATCTCTTGCACTTGGAATTGATCTTACTACACTTGGATTAAATTTGAATTCATCGGAAAATCTACACAAGACGTTTGGGTCTCCATGGTCTGATGAACCTGCAAAGGGTGATCCAGAGTTTAATGTGCCACAATGTTATTACGCAAAGCAGCCCCCTGCTTTACATCAAGGTTACTTTTCAAAGTTTTCGGTGGAAACATTGTTTTACATATTCTACAGCATGCCCAAAGACGAAGCACAATTATATGCTGCAAATGAGCTGCACAATAGAGGTTGGTATTATCACAAAGAGAATCGTTTCTGGTTTATAAGAGTTCCCAACATGGAGCCCCTTGTTAAAACGAACACATACGAGAGAGGATCTTATCACTGTTTCGATCCAAACACATTTGAAACTGTTCGCAAGGATAACTTTGTTCTACATTATGAAATGTTGGAAAAGAGACCGCCTCTACCACAGCATTGA 1956 0.4412 MSGLLNSSLNGSASNLPDGAGRSFATSFSGQSGAASPVFHHTGSLQGLHNIHGSFNVPNMPGTLTSRNSTINSVPSGGVQQQTGSLSSGRFGSNNLPVALSQLSHGSAHGHSGVANRGGINVVGNPGFSSSTNGVGGSIPGILPTSAAIGNRNAVPGLGVSQILGNAGPRITSSVGNMVGGGNLGRTGGGLSVPGLTSRHLSANSGSAGLGVQGQNRLMSGVLPQGSPQVISMLGNSYPNAGGPLSQSHVMGMLNDVNSSDNSPFDMNDFPQLTSRPSSAGGPQGQLGSLRKQGLSPIVQQNQEFSIQNEDFPALPGFKGGNADYAMDMHQKEQLHDNAVPMMQSQHFPMGRSAGFSLGGTYSSHRTQQQQQHAPSVSSGGVSFSSVNNQDLLHLHGSDIFPSTHSTYHSQASGPPGIGLRPLNSPNTVSSMGQYDQILQQYQQHQNQSQFRLQMSAVNQSFRDQGMKAMQTAQSTPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPEFNVPQCYYAKQPPALHQGYFSKFSVETLFYIFYSMPKDEAQLYAANELHNRGWYYHKENRFWFIRVPNMEPLVKTNTYERGSYHCFDPNTFETVRKDNFVLHYEMLEKRPPLPQH 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00419 651 MobiDBLite consensus disorder prediction 355 383 - -
Aip03g00419 651 MobiDBLite consensus disorder prediction 247 290 - -
Aip03g00419 651 MobiDBLite consensus disorder prediction 357 383 - -
Aip03g00419 651 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 2 651 - -
Aip03g00419 651 PANTHER CCR4 NOT-RELATED 2 651 IPR040168 GO:0030015
Aip03g00419 651 MobiDBLite consensus disorder prediction 59 90 - -
Aip03g00419 651 MobiDBLite consensus disorder prediction 251 290 - -
Aip03g00419 651 Gene3D - 470 651 IPR038635 -
Aip03g00419 651 Pfam NOT2 / NOT3 / NOT5 family 520 642 IPR007282 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00419 Aip-Chr3 4119890 4125642 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00419 K12605 - gmx:100807026 1146.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00419 03 4119890 4125642 Aip03g00419 03 4119890 4125642 ECH