Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g00416 ATGGAGCAGAGGAGAGGAGGACTAGTGTCGTTATCGCCGTCGCAGCCTCCGCGCTCCGGCGGAGACAAGACTCCGGCGTCGGCGCGAGATCTGCGATCTGCGGATGGTCACAGCAAACACGATAAGGACAAAGGCGTCAATGTGCAGGTCCTCGTTCGTTGCAGGCCGTTGAGTGAAGACGAAGCGAGGCTGCATACGCCGGTTGTGATTTCTTGTAACGAAGGAAGAAGAGAAGTTTCCGCAGTGCAGAGTATAGCTAACAAGCAGATCGATAGGACATTCGCATTTGATAAGGTTTTTGGTCCCAACTCCGAGCAGATAGAACTGTATGAGCAGGCAGTGTCTCCTATTGTGAATGAAGTGCTTGAGGGCTATAACTGCACCATTTTTGCTTATGGTCAGACAGGGACAGGGAAGACGTACACAATGGAAGGAGGTGCAAGAAAGAAGGTGATTCATTTCACCTGTGTCATCGCTCTTTATAGTATTTATCTTGTTCTATCTGTGAAAGAGATTTTTGATATATTGGAAGCTCAGAATGCTGAGTATAGCATGAAAGTAACATTTTTAGAGCTTTACAATGAGGAGATAACAGATCTCTTGGCCCCTGAGGAGACCTCGAAGTTTGTAGATGACAAATCTAAGAAACCTATAGCCCTTATGGAGGATGGGAAGGGGGGTGTTTTTGTCAGAGGATTAGAAGAAGAGATTGTTCGCACTGCCAATGAAATTTACAAGATATTGGAAAAAGGTTCTGCCAAACGGCGAACAGCTGAGACTCTTCTTAACAAACAAAGCAGTCGTTCTCACTCCATCTTTTCTATCACAATTCATATTAAGGAGTGTACCCCCGAGGGTGAAGAAATGATTAAATGTGGGAAGCTGAATCTTGTGGATCTCGCTGGCTCTGAGAATATTTCACGTTCTGGTGCAAGAGAGGGTAGAGCAAGGGAAGCTGGGGAGATAAATAAAAGCTTGCTTACTCTAGGCCGAGTAATTAATGCCCTAGTTGAGCACTCAGGCCATGTTCCATATAGGGATAGCAAATTAACAAGATTGTTGAGAGATTCCCTGGGTGGTAAAACCAAGACATGCATTATTGCCACAATATCACCCTCCATTCACTGTCTGGAAGAAACCCTTAGCACCTTAGATTATGCACATCGTGCTAAAAATATCAAGAACAAACCAGAGGTCAATCAGAAGATGGTAAAATCTGCACTCATTAAGGATCTGTATTCTGAAATTGACAGGCTGAAGCAAGAGGTATATGCTGCAAGAGAGAAGAACGGAATCTATATACCACGTGATCGTTATCTTAATGAAGAAGCAGAGAAGAAGGCCATGGCTGAAAAGATAGAACGCATGGAACTAGAGGCAGACTCTAAAGATAAGCAACTGATGGAGCTTCATCAACTTTACAATTGTCAGCAACTTTTGACTGCACAGTTAAGTGATAAACTTGAAAAAACTGAGAAAAATCTGGAAGAAACTGAGCGGTCATTAGTTGATCTTGAGGAAAGACAAAAACAAGCAAATGCAACAATAAAGGAAAAGGAATTTTTGATATTAAATCTACTTAAATCTGAGAAAGCACTTGTGCAGCATGCCATTGAGCTGCGGGAGGAGCTTGAGAATGCTGCATCAGATGTGACAAACCTGTTTTCTAAAATTGAACGGAAGGATAAAATTGAAGAAGGAAACAGAATACTTATCCAGAAATTCCAGTCTCAGTTGGCTCAACAGCTTGAAAATCTGCACAAGACAGTTGCAGCCTCTGTTATCCAACAAGAGCAGCAGCTGAAGGAGATGGAGGAAGATATGCACTCTTTTGTATCTACAAAGGCAGAGGCTACTGAAGATCTTAGAGAACGGGTAGGAAAATTGAAAAACATGTATGCTTCTGGCATTAAATCTTTGGACAATTTAGCTGAGCAGCTTAAGGGAAATAATAAGTTAACTTTTGAGGATTTGAATTCGGAAGTAGCAAAGCATTCATCTGCCTTGGAAGATCTTTTTAAAGGAATTGCCTTAGAAGCTGATTCATTACTACATGATCTTCAAAGTAGTCTCCACAAGCAAGAGGCCAAGTTAACTGCTTATGCTCACCAACAAAGACAGGCACATGCTAGATCAGTGGAGACTACCCGTACTGTATCTAAAATAACCGTGAACTTCTTCGAGAAATTAGATACACATGCATCCAATCTAACCGAAATAGTGGAAGAAGCCCAAATTGCCAACGATAAGAAATTATGTGAACTTGAAAAGAAGTTTGAGGAGTGTGCTGCTTATGAAGAAAAACAACTACTGGAAAAAGTGGCAGAAATGCTAGCAAGTTCAAATGCTAGGAAGAAAAAACTGGTTCAAATGGCGGTTAATGATCTTCGTGAGAGTGCGAATAGTAAAACCAGTAAACTACGACAAGAAACATTAACCATGCAAGATTCCACTTCTTCAGTTAAAGCCGAGTGGAGAGTTCACATGGAAAAAACAGAGTCCAACTATCATGAGGATACTTCCACTGTTGAATCTGGAAAGAATGACCTTGCGGAAGTCCTTCAGAACTGTCTTAACAAGGCAGAAGTTGGTTCCCAACAATGGAGGAATGCTCAAGAGTCTTTGCTCAGTCTAGAGAAAAGAAATGCTGCTTCTGTGGATACAATTATCCGGCGAGGAATTGAAGCTAATCAAGTTTTACGAGCTCGATTCTCAAGTGCTGTGTCAACTACACTTGAAGATGCGGAAGTAGCAAACAAGGACATCAACTCATCGGTTGAACATTCGTTGCAACTTGATCATGAAGCGTGTGGGAATCTGAACTCCATGATTACGCCATGCTGCGGTGACTTGAGAGAATTAAAGGGCAATCATTACCATAGAATTGTAGAGATAACTGATAATGCAGGGAAATGTCTTCTCAGCGAATACACAGTGGACGAACCATCCTGTTCAACACCAAGAAAAAGACCCTTCAATTTACCCAGTGTTTCATCCATAGAAGAACTAAGAACTCCCTCATTTGAGGAATTGCTGAAGTCATTCTGGGATGCTAAGTCTCCAAAACAACATGCAAATGGTGATGTTAGATATAATAATGGGAACTATGAAGCTGCTCAATCTGTAACAGATTCCAGAGTTCCTCTCATTGCAAGTAACTAG 3162 0.4175 MEQRRGGLVSLSPSQPPRSGGDKTPASARDLRSADGHSKHDKDKGVNVQVLVRCRPLSEDEARLHTPVVISCNEGRREVSAVQSIANKQIDRTFAFDKVFGPNSEQIELYEQAVSPIVNEVLEGYNCTIFAYGQTGTGKTYTMEGGARKKVIHFTCVIALYSIYLVLSVKEIFDILEAQNAEYSMKVTFLELYNEEITDLLAPEETSKFVDDKSKKPIALMEDGKGGVFVRGLEEEIVRTANEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATISPSIHCLEETLSTLDYAHRAKNIKNKPEVNQKMVKSALIKDLYSEIDRLKQEVYAAREKNGIYIPRDRYLNEEAEKKAMAEKIERMELEADSKDKQLMELHQLYNCQQLLTAQLSDKLEKTEKNLEETERSLVDLEERQKQANATIKEKEFLILNLLKSEKALVQHAIELREELENAASDVTNLFSKIERKDKIEEGNRILIQKFQSQLAQQLENLHKTVAASVIQQEQQLKEMEEDMHSFVSTKAEATEDLRERVGKLKNMYASGIKSLDNLAEQLKGNNKLTFEDLNSEVAKHSSALEDLFKGIALEADSLLHDLQSSLHKQEAKLTAYAHQQRQAHARSVETTRTVSKITVNFFEKLDTHASNLTEIVEEAQIANDKKLCELEKKFEECAAYEEKQLLEKVAEMLASSNARKKKLVQMAVNDLRESANSKTSKLRQETLTMQDSTSSVKAEWRVHMEKTESNYHEDTSTVESGKNDLAEVLQNCLNKAEVGSQQWRNAQESLLSLEKRNAASVDTIIRRGIEANQVLRARFSSAVSTTLEDAEVANKDINSSVEHSLQLDHEACGNLNSMITPCCGDLRELKGNHYHRIVEITDNAGKCLLSEYTVDEPSCSTPRKRPFNLPSVSSIEELRTPSFEELLKSFWDAKSPKQHANGDVRYNNGNYEAAQSVTDSRVPLIASN 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g00416 1053 SMART kinesin_4 45 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00416 1053 MobiDBLite consensus disorder prediction 1 43 - -
Aip03g00416 1053 CDD KISc_BimC_Eg5 45 402 - -
Aip03g00416 1053 Coils Coil 527 561 - -
Aip03g00416 1053 Coils Coil 601 621 - -
Aip03g00416 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 433 IPR027417 -
Aip03g00416 1053 PRINTS Kinesin heavy chain signature 343 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00416 1053 PRINTS Kinesin heavy chain signature 124 145 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00416 1053 PRINTS Kinesin heavy chain signature 260 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00416 1053 PRINTS Kinesin heavy chain signature 294 312 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00416 1053 PANTHER KINESIN-LIKE PROTEIN KIN-5D 3 1053 - -
Aip03g00416 1053 ProSitePatterns Kinesin motor domain signature. 293 304 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aip03g00416 1053 PANTHER KINESIN-LIKE PROTEIN KIF11 3 1053 - -
Aip03g00416 1053 MobiDBLite consensus disorder prediction 28 43 - -
Aip03g00416 1053 Coils Coil 409 429 - -
Aip03g00416 1053 Coils Coil 439 473 - -
Aip03g00416 1053 Pfam Kinesin motor domain 53 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aip03g00416 1053 Coils Coil 481 522 - -
Aip03g00416 1053 Gene3D Kinesin motor domain 43 433 IPR036961 -
Aip03g00416 1053 ProSiteProfiles Kinesin motor domain profile. 47 393 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g00416 Aip-Chr3 4045289 4051643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g00416 47 423 Miscellaneous Gene Families AT5G06670 37.337 8.19e-62 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g00416 K10398 - gmx:100816693 1713.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g00416 03 4045289 4051643 Aip03g00416 03 4045289 4051643 ECH
Aip08g00465 08 3602395 3608179 Aip03g00416 03 4045289 4051643 PCT